RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 HCSTQ9UBK5 93 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 FAM50BQ9Y247 325 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 RALGAPA2Q2PPJ7 1873 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 PIEZO1Q92508 2521 aa12.01□□□□□ -0.49
CHD3-216ENST00000573936 WDFY4Q6ZS81 3184 aa12□□□□□ -0.49
CHD3-216ENST00000573936 SMIM28A0A1B0GU29 152 aa12□□□□□ -0.49
CHD3-216ENST00000573936 PTGESO14684 152 aa12□□□□□ -0.49
CHD3-216ENST00000573936 NRP1O14786 923 aa12□□□□□ -0.49
CHD3-216ENST00000573936 XPOTO43592 962 aaKnown RBP12□□□□□ -0.49
CHD3-216ENST00000573936 ITGB1P05556 798 aa12□□□□□ -0.49
CHD3-216ENST00000573936 ADRB2P07550 413 aa12□□□□□ -0.49
CHD3-216ENST00000573936 ADSSP30520 456 aa12□□□□□ -0.49
CHD3-216ENST00000573936 SLC11A1P49279 550 aa12□□□□□ -0.49
CHD3-216ENST00000573936 PPP2R3AQ06190 1150 aa12□□□□□ -0.49
CHD3-216ENST00000573936 SLC10A6Q3KNW5 377 aa12□□□□□ -0.49
CHD3-216ENST00000573936 NELFCDQ8IXH7 590 aa12□□□□□ -0.49
CHD3-216ENST00000573936 GLIS3Q8NEA6 775 aa12□□□□□ -0.49
CHD3-216ENST00000573936 POF1BQ8WVV4 589 aa12□□□□□ -0.49
CHD3-216ENST00000573936 IGSF21Q96ID5 467 aa12□□□□□ -0.49
CHD3-216ENST00000573936 PPP1R10Q96QC0 940 aaKnown RBP12□□□□□ -0.49
CHD3-216ENST00000573936 ASB7Q9H672 318 aa12□□□□□ -0.49
CHD3-216ENST00000573936 ALG13Q9NP73 1137 aaKnown RBP12□□□□□ -0.49
CHD3-216ENST00000573936 CD320Q9NPF0 282 aa12□□□□□ -0.49
CHD3-216ENST00000573936 DNAJB4Q9UDY4 337 aa12□□□□□ -0.49
CHD3-216ENST00000573936 CPSF3Q9UKF6 684 aaKnown RBP12□□□□□ -0.49
CHD3-216ENST00000573936 TTC26A0AVF1 554 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 LACTBL1A8MY62 500 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 NT5C1B-RDH14C9J2C7 533 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 GRM6O15303 877 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 CALUO43852 315 aaPredicted RBP11.99□□□□□ -0.49
CHD3-216ENST00000573936 EXTL3O43909 919 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 FAM189A1O60320 539 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 IL18RAPO95256 599 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 CXCL8P10145 99 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 TNFSF9P41273 254 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 ACOT2P49753 483 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 SEZ6Q53EL9 994 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 TIGD5Q53EQ6 642 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 DDX53Q86TM3 631 aaKnown RBP11.99□□□□□ -0.49
CHD3-216ENST00000573936 GPD1LQ8N335 351 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 KIAA0895Q8NCT3 520 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 SPATA20Q8TB22 786 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 PPP2R3CQ969Q6 453 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
CHD3-216ENST00000573936 FAM213AQ9BRX8 229 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 PCIF1Q9H4Z3 704 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 DERAQ9Y315 318 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 PCDHA5Q9Y5H7 936 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 ATG2AQ2TAZ0 1938 aa11.99□□□□□ -0.49
CHD3-216ENST00000573936 ZNF233A6NK53 670 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 TISP43B9A030 160 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 PDXKO00764 312 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 TGFB1I1O43294 461 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 TADA2AO75478 443 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 CYP3A5P20815 502 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 RPL9P32969 192 aaKnown RBP11.98□□□□□ -0.49
CHD3-216ENST00000573936 MCM4P33991 863 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 HOXD13P35453 343 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 PBX3P40426 434 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 PPP1R2P41236 205 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 MYBPC2Q14324 1141 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 SURF1Q15526 300 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 NAB2Q15742 525 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 ENOX2Q16206 610 aaKnown RBP11.98□□□□□ -0.49
CHD3-216ENST00000573936 COBLL1Q53SF7 1204 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 GLRA4Q5JXX5 417 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 ZNF658Q5TYW1 1059 aaPredicted RBP11.98□□□□□ -0.49
CHD3-216ENST00000573936 DCLRE1AQ6PJP8 1040 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 NT5DC4Q86YG4 428 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 C12orf56Q8IXR9 622 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 GUF1Q8N442 669 aaKnown RBP11.98□□□□□ -0.49
CHD3-216ENST00000573936 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.98□□□□□ -0.49
CHD3-216ENST00000573936 MICAL1Q8TDZ2 1067 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 KIF12Q96FN5 646 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 CBWD1Q9BRT8 395 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 IKZF4Q9H2S9 585 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 NGRNQ9NPE2 291 aaKnown RBP11.98□□□□□ -0.49
CHD3-216ENST00000573936 TLR9Q9NR96 1032 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 AGPAT3Q9NRZ7 376 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 LMBRD1Q9NUN5 540 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 HSPBP1Q9NZL4 362 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 UBQLN1Q9UMX0 589 aaKnown RBP11.98□□□□□ -0.49
CHD3-216ENST00000573936 SSX2IPQ9Y2D8 614 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 PRG3Q9Y2Y8 225 aaPredicted RBP11.98□□□□□ -0.49
CHD3-216ENST00000573936 MUC6Q6W4X9 2439 aa11.98□□□□□ -0.49
CHD3-216ENST00000573936 GRXCR2A6NFK2 248 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 CASTOR2A6NHX0 329 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 H3BQ06 376 aaPredicted RBP11.97□□□□□ -0.49
CHD3-216ENST00000573936 TMEM189-UBE2V1I3L0A0 370 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 CLIC2O15247 247 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 IL9P15248 144 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 MRE11P49959 708 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 ELAVL2Q12926 359 aaKnown RBP11.97□□□□□ -0.49
CHD3-216ENST00000573936 STIM1Q13586 685 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 ZBTB41Q5SVQ8 909 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 CRELD2Q6UXH1 353 aaPredicted RBP11.97□□□□□ -0.49
CHD3-216ENST00000573936 TMC7Q7Z402 723 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 SLC9A9Q8IVB4 645 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 BRSK2Q8IWQ3 736 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms