RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ALG13Q9NP73 1137 aaKnown RBP18.76■□□□□ 0.59
LITAF-212ENST00000573332 PUF60Q9UHX1 559 aaKnown RBP18.76■□□□□ 0.59
LITAF-212ENST00000573332 MAPK8IP1Q9UQF2 711 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 C2CD2Q9Y426 696 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 GOLGA8IPA6NC78 632 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 ZNF233A6NK53 670 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 GOLGA8JA6NMD2 632 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 TMEM189-UBE2V1I3L0A0 370 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 XPOTO43592 962 aaKnown RBP18.75■□□□□ 0.59
LITAF-212ENST00000573332 CALUO43852 315 aaPredicted RBP18.75■□□□□ 0.59
LITAF-212ENST00000573332 EFEMP2O95967 443 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 BMP6P22004 513 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 CAMK1Q14012 370 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 PTPROQ16827 1216 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 TMEM173Q86WV6 379 aaPredicted RBP18.75■□□□□ 0.59
LITAF-212ENST00000573332 ADSSL1Q8N142 457 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 POF1BQ8WVV4 589 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 MRPL38Q96DV4 380 aaKnown RBP18.75■□□□□ 0.59
LITAF-212ENST00000573332 DDX27Q96GQ7 796 aaKnown RBP18.75■□□□□ 0.59
LITAF-212ENST00000573332 MARCH5Q9NX47 278 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 UBQLN1Q9UMX0 589 aaKnown RBP18.75■□□□□ 0.59
LITAF-212ENST00000573332 MTCH2Q9Y6C9 303 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 CHD7Q9P2D1 2997 aa18.75■□□□□ 0.59
LITAF-212ENST00000573332 CASTOR2A6NHX0 329 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 DNAJB1P25685 340 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 LRPAP1P30533 357 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 RPL9P32969 192 aaKnown RBP18.74■□□□□ 0.59
LITAF-212ENST00000573332 SOX4Q06945 474 aaPredicted RBP18.74■□□□□ 0.59
LITAF-212ENST00000573332 SURF1Q15526 300 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 EDRF1Q3B7T1 1238 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 SPATA1Q5VX52 437 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 CENPPQ6IPU0 288 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 PDE12Q6L8Q7 609 aaKnown RBP18.74■□□□□ 0.59
LITAF-212ENST00000573332 DCLRE1AQ6PJP8 1040 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 DDX53Q86TM3 631 aaKnown RBP18.74■□□□□ 0.59
LITAF-212ENST00000573332 CBWD2Q8IUF1 395 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 BCL7CQ8WUZ0 217 aaPredicted RBP18.74■□□□□ 0.59
LITAF-212ENST00000573332 KIF12Q96FN5 646 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 PAAF1Q9BRP4 392 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 RBAKQ9NYW8 714 aaPredicted RBP18.74■□□□□ 0.59
LITAF-212ENST00000573332 PRG3Q9Y2Y8 225 aaPredicted RBP18.74■□□□□ 0.59
LITAF-212ENST00000573332 SZT2Q5T011 3432 aa18.74■□□□□ 0.59
LITAF-212ENST00000573332 KIAA1671Q9BY89 1806 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 NR3C1P04150 777 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 CYP2J2P51589 502 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 STIM1Q13586 685 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 SNRNP35Q16560 246 aaKnown RBP18.73■□□□□ 0.59
LITAF-212ENST00000573332 UPP1Q16831 310 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 JADE1Q6IE81 842 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 FOXR2Q6PJQ5 311 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 RNF168Q8IYW5 571 aaPredicted RBP18.73■□□□□ 0.59
LITAF-212ENST00000573332 C18orf25Q96B23 403 aaPredicted RBP18.73■□□□□ 0.59
LITAF-212ENST00000573332 FAM212AQ96EL1 285 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 DHTKD1Q96HY7 919 aaPredicted RBP18.73■□□□□ 0.59
LITAF-212ENST00000573332 ADAM28Q9UKQ2 775 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 STXBP5LQ9Y2K9 1186 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 NLRC5Q86WI3 1866 aa18.73■□□□□ 0.59
LITAF-212ENST00000573332 PPP1R3GB7ZBB8 358 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 FSCN2O14926 492 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 MAPK13O15264 365 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 EXOC3O60645 756 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 FOSL2P15408 326 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 RPL13P26373 211 aaKnown RBP18.72■□□□□ 0.59
LITAF-212ENST00000573332 CLCNKBP51801 687 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 WNT7BP56706 349 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 SPAG1Q07617 926 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 TMEM132DQ14C87 1099 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 ISM2Q6H9L7 571 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 BEST2Q8NFU1 509 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 MFSD14AQ96MC6 490 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 GOLGA2P5Q9HBQ8 144 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 TLR9Q9NR96 1032 aa18.72■□□□□ 0.59
LITAF-212ENST00000573332 BIN1O00499 593 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 PSMA7O14818 248 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 TADA2AO75478 443 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 NFICP08651 508 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 CD44P16070 742 aaKnown RBP18.71■□□□□ 0.59
LITAF-212ENST00000573332 IGFBP4P22692 258 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 CCNE1P24864 410 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 LRRC63Q05C16 580 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 PSMD6Q15008 389 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 CD300LGQ6UXG3 332 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 RBM43Q6ZSC3 357 aaKnown RBP18.71■□□□□ 0.59
LITAF-212ENST00000573332 EFCAB13Q8IY85 973 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 GPR65Q8IYL9 337 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 VN1R3Q9BXE9 311 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 PDE11AQ9HCR9 933 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 NGRNQ9NPE2 291 aaKnown RBP18.71■□□□□ 0.59
LITAF-212ENST00000573332 CACNG4Q9UBN1 327 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 TUBGCP4Q9UGJ1 667 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 IRAK3Q9Y616 596 aa18.71■□□□□ 0.59
LITAF-212ENST00000573332 F8W810 466 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 PODXLO00592 558 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 B3GAT3O94766 335 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 KIF4AO95239 1232 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 SOD2P04179 222 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 PTMSP20962 102 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 PAX3P23760 479 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 NR2F2P24468 414 aa18.7■□□□□ 0.58
LITAF-212ENST00000573332 MCCD1P59942 119 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms