RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SCP2P22307 547 aa18.95■□□□□ 0.62
SMG6-212ENST00000573153 BRCC3P46736 316 aa18.95■□□□□ 0.62
SMG6-212ENST00000573153 NOLC1Q14978 699 aaKnown RBP eCLIP18.95■□□□□ 0.62
SMG6-212ENST00000573153 ZBTB41Q5SVQ8 909 aa18.95■□□□□ 0.62
SMG6-212ENST00000573153 PALB2Q86YC2 1186 aa18.95■□□□□ 0.62
SMG6-212ENST00000573153 LARP4BQ92615 738 aaKnown RBP18.95■□□□□ 0.62
SMG6-212ENST00000573153 C18orf25Q96B23 403 aaPredicted RBP18.95■□□□□ 0.62
SMG6-212ENST00000573153 DDX27Q96GQ7 796 aaKnown RBP18.95■□□□□ 0.62
SMG6-212ENST00000573153 TTPALQ9BTX7 342 aa18.95■□□□□ 0.62
SMG6-212ENST00000573153 CCDC94Q9BW85 323 aaPredicted RBP18.95■□□□□ 0.62
SMG6-212ENST00000573153 WDFY4Q6ZS81 3184 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 TMEM221A6NGB7 291 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 I3L4J1 428 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 M0R296 226 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 TBC1D4O60343 1298 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 ASGR2P07307 311 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 ADRB2P07550 413 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 TKTP29401 623 aaKnown RBP18.94■□□□□ 0.62
SMG6-212ENST00000573153 TNFSF9P41273 254 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 NASPP49321 788 aaPredicted RBP18.94■□□□□ 0.62
SMG6-212ENST00000573153 SMTNP53814 917 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 ZBTB6Q15916 424 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 DCLRE1AQ6PJP8 1040 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.94■□□□□ 0.62
SMG6-212ENST00000573153 GLYCTKQ8IVS8 523 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 STRA6Q9BX79 667 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 LARSQ9P2J5 1176 aaKnown RBP18.94■□□□□ 0.62
SMG6-212ENST00000573153 MTRRQ9UBK8 725 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 NR2E1Q9Y466 385 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 MUC6Q6W4X9 2439 aa18.94■□□□□ 0.62
SMG6-212ENST00000573153 CCDC195A0A1B0GUA6 201 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 TTC26A0AVF1 554 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 H0YCG3 227 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 PPP1R37O75864 691 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 B3GAT3O94766 335 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 DDIT3P35638 169 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 SIGLEC14Q08ET2 396 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 DHX8Q14562 1220 aaKnown RBP18.93■□□□□ 0.62
SMG6-212ENST00000573153 SLC39A14Q15043 492 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 PSMD5Q16401 504 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 HSCBQ8IWL3 235 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 TMEM87AQ8NBN3 555 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 DNAJC19Q96DA6 116 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 UROC1Q96N76 676 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 ACAP3Q96P50 834 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 IKZF4Q9H2S9 585 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 PLEKHA4Q9H4M7 779 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 WDR6Q9NNW5 1121 aaKnown RBP18.93■□□□□ 0.62
SMG6-212ENST00000573153 TSHZ2Q9NRE2 1034 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 TOPORSQ9NS56 1045 aaPredicted RBP18.93■□□□□ 0.62
SMG6-212ENST00000573153 ANKFY1Q9P2R3 1169 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 TBX20Q9UMR3 447 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 DOCK6Q96HP0 2047 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 NOTCH4Q99466 2003 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 MYO10Q9HD67 2058 aa18.93■□□□□ 0.62
SMG6-212ENST00000573153 TISP43B9A030 160 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 PODXLO00592 558 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 ZMYND10O75800 440 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 PDGFBP01127 241 aaPredicted RBP18.92■□□□□ 0.62
SMG6-212ENST00000573153 CXCL8P10145 99 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 HARSP12081 509 aaKnown RBP18.92■□□□□ 0.62
SMG6-212ENST00000573153 NMT1P30419 496 aaKnown RBP18.92■□□□□ 0.62
SMG6-212ENST00000573153 PLA2G5P39877 138 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 GTF2BQ00403 316 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 ELAVL2Q12926 359 aaKnown RBP18.92■□□□□ 0.62
SMG6-212ENST00000573153 CYP26C1Q6V0L0 522 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 CCDC149Q6ZUS6 474 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 MAP4K3Q8IVH8 894 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 TDRD5Q8NAT2 981 aaKnown RBP18.92■□□□□ 0.62
SMG6-212ENST00000573153 KREMEN2Q8NCW0 462 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 ST6GALNAC4Q9H4F1 302 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 PARVGQ9HBI0 331 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 ZDHHC7Q9NXF8 308 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 TUBGCP4Q9UGJ1 667 aa18.92■□□□□ 0.62
SMG6-212ENST00000573153 ANK1P16157 1881 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 MYMKA6NI61 221 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 TRAK2O60296 914 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 YARSP54577 528 aaKnown RBP18.91■□□□□ 0.62
SMG6-212ENST00000573153 CREMQ03060 361 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 CEBPZQ03701 1054 aaKnown RBP18.91■□□□□ 0.62
SMG6-212ENST00000573153 STRN3Q13033 797 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 RAB33AQ14088 237 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 MRPL58Q14197 206 aaKnown RBP18.91■□□□□ 0.62
SMG6-212ENST00000573153 CEP57Q86XR8 500 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 LINC00301Q8NCQ3 95 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 MYADMQ96S97 322 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 PRKD2Q9BZL6 878 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 STK17AQ9UEE5 414 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 SORCS3Q9UPU3 1222 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 BACE2Q9Y5Z0 518 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 CLUHO75153 1309 aa18.91■□□□□ 0.62
SMG6-212ENST00000573153 A0A0B4J269 797 aa18.9■□□□□ 0.62
SMG6-212ENST00000573153 ANKRD63C9JTQ0 380 aa18.9■□□□□ 0.62
SMG6-212ENST00000573153 K7ENM7 598 aa18.9■□□□□ 0.62
SMG6-212ENST00000573153 ENOX2Q16206 610 aaKnown RBP18.9■□□□□ 0.62
SMG6-212ENST00000573153 ZC2HC1CQ53FD0 456 aaPredicted RBP18.9■□□□□ 0.62
SMG6-212ENST00000573153 MYCT1Q8N699 235 aa18.9■□□□□ 0.62
SMG6-212ENST00000573153 SMG7Q92540 1137 aaKnown RBP18.9■□□□□ 0.62
SMG6-212ENST00000573153 TCHPQ9BT92 498 aa18.9■□□□□ 0.62
SMG6-212ENST00000573153 FGFBP2Q9BYJ0 223 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms