RNA–Protein interactions for RNA: ENST00000572965.1

RPH3AL-209, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 2

Gene RPH3AL, Length 880 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-209ENST00000572965 TRAF3IP3Q9Y228 551 aa20.51■□□□□ 0.87
RPH3AL-209ENST00000572965 DERAQ9Y315 318 aa20.51■□□□□ 0.87
RPH3AL-209ENST00000572965 LAMA3Q16787 3333 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 NT5C1B-RDH14C9J2C7 533 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 IGFBP4P22692 258 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 NR2F2P24468 414 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 PLCB3Q01970 1234 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 SNRNP35Q16560 246 aaKnown RBP20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 CCDC183Q5T5S1 534 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 CEP135Q66GS9 1140 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 KLHL10Q6JEL2 608 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 USP37Q86T82 979 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 SLC9A9Q8IVB4 645 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 ADSSL1Q8N142 457 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 RDH13Q8NBN7 331 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 CACTINQ8WUQ7 758 aaKnown RBP20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 FNBP1Q96RU3 617 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 MTMR10Q9NXD2 777 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 DACH1Q9UI36 760 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 R3HCC1Q9Y3T6 440 aaKnown RBP20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 KIAA1671Q9BY89 1806 aa20.5■□□□□ 0.87
RPH3AL-209ENST00000572965 BICDL2A1A5D9 508 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 LPXNO60711 386 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 TADA2AO75478 443 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 ITGB1P05556 798 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 FOSL2P15408 326 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 RPL9P32969 192 aaKnown RBP20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 LRRC63Q05C16 580 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 EDRF1Q3B7T1 1238 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 JADE1Q6IE81 842 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 CRELD2Q6UXH1 353 aaPredicted RBP20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 IGSF21Q96ID5 467 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 ZMAT2Q96NC0 199 aaKnown RBP20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 CDX2Q99626 313 aaPredicted RBP20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 ALG13Q9NP73 1137 aaKnown RBP20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 LZTS1Q9Y250 596 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 C2CD2Q9Y426 696 aa20.49■□□□□ 0.87
RPH3AL-209ENST00000572965 LAMA2P24043 3122 aaKnown RBP20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 RFXAPO00287 272 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 CETN3O15182 167 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 ADRB2P07550 413 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 CYP3A5P20815 502 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 CCNE1P24864 410 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 SPAG1Q07617 926 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 NFIL3Q16649 462 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 CENPPQ6IPU0 288 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 CBWD2Q8IUF1 395 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 MLKLQ8NB16 471 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 MICAL1Q8TDZ2 1067 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 TMEM174Q8WUU8 243 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 POF1BQ8WVV4 589 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 MYLIPQ8WY64 445 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 PPP2R3CQ969Q6 453 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 FBXL18Q96ME1 805 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 LMCD1Q9NZU5 365 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 TRIP11Q15643 1979 aa20.48■□□□□ 0.87
RPH3AL-209ENST00000572965 EPOPA6NHQ4 379 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 GRM6O15303 877 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 TRAPPC3O43617 180 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 B4GALT3O60512 393 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 B3GAT3O94766 335 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 TMEM191BP0C7N4 346 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 TFAMQ00059 246 aaKnown RBP20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 ELAVL2Q12926 359 aaKnown RBP20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 PAK1Q13153 545 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 ADAM9Q13443 819 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 PDE12Q6L8Q7 609 aaKnown RBP20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 DCLRE1AQ6PJP8 1040 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 SASS6Q6UVJ0 657 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 SPPL3Q8TCT6 385 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 C18orf25Q96B23 403 aaPredicted RBP20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 MRPL38Q96DV4 380 aaKnown RBP20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 CXCL16Q9H2A7 254 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 ENTPD7Q9NQZ7 604 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 TLR9Q9NR96 1032 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 ADAM28Q9UKQ2 775 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 NUB1Q9Y5A7 615 aa20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 SF3B1O75533 1304 aaKnown RBP eCLIP20.47■□□□□ 0.87
RPH3AL-209ENST00000572965 PODXLO00592 558 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 TNNC2P02585 160 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 NFICP08651 508 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 KRT13P13646 458 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 CA8P35219 290 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 PSMC2P35998 433 aaKnown RBP20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 FKBP3Q00688 224 aaKnown RBP20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 CYP24A1Q07973 514 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 NAB2Q15742 525 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 TIGD5Q53EQ6 642 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 SPATA1Q5VX52 437 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 TMC7Q7Z402 723 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 DDX53Q86TM3 631 aaKnown RBP20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 ZSWIM2Q8NEG5 633 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 NELFBQ8WX92 580 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 ANKRD36BP1Q96IX9 119 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 GOLGA2P5Q9HBQ8 144 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 PDE11AQ9HCR9 933 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 DMAC2Q9NW81 257 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 TUBGCP4Q9UGJ1 667 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 CTNND2Q9UQB3 1225 aa20.46■□□□□ 0.87
RPH3AL-209ENST00000572965 MEFVO15553 781 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms