RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 E9PMD0 336 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 SPINT1O43278 529 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 B4GALT5O43286 388 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 MBTPS2O43462 519 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 ADAM23O75077 832 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 ZC3H11AO75152 810 aaKnown RBP eCLIP8.21□□□□□ -1.1
NUP88-205ENST00000572809 DDHD2O94830 711 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 CXCL14O95715 111 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 POMCP01189 267 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 GALTP07902 379 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 ARF4P18085 180 aaPredicted RBP8.21□□□□□ -1.1
NUP88-205ENST00000572809 CDC25AP30304 524 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 ATP2C1P98194 919 aaPredicted RBP8.21□□□□□ -1.1
NUP88-205ENST00000572809 CUL4AQ13619 759 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 CLUL1Q15846 466 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 PLPP4Q5VZY2 271 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 ZNF280BQ86YH2 543 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 ZBTB8OSQ8IWT0 167 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 MRPL43Q8N983 215 aaKnown RBP8.21□□□□□ -1.1
NUP88-205ENST00000572809 IGSF21Q96ID5 467 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 FAM193BQ96PV7 902 aaPredicted RBP8.21□□□□□ -1.1
NUP88-205ENST00000572809 CDCA3Q99618 268 aaPredicted RBP8.21□□□□□ -1.1
NUP88-205ENST00000572809 TRIM6Q9C030 488 aaPredicted RBP8.21□□□□□ -1.1
NUP88-205ENST00000572809 GBP3Q9H0R5 595 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 C2orf40Q9H1Z8 148 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 FZD8Q9H461 694 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 DDX19AQ9NUU7 478 aaKnown RBP8.21□□□□□ -1.1
NUP88-205ENST00000572809 PRMT7Q9NVM4 692 aaPredicted RBP8.21□□□□□ -1.1
NUP88-205ENST00000572809 CLEC1BQ9P126 229 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 DNAJB4Q9UDY4 337 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 CD207Q9UJ71 328 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 FAN1Q9Y2M0 1017 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 PLXNA4Q9HCM2 1894 aa8.21□□□□□ -1.1
NUP88-205ENST00000572809 ARID2Q68CP9 1835 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 REV3LO60673 3130 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 ARL5CA6NH57 179 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 PP2D1A8MPX8 630 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 HIDE1A8MVS5 230 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 TBX10O75333 385 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 NPTXRO95502 500 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 EYA4O95677 639 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 NAMPTP43490 491 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 SLC11A1P49279 550 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 AFF1P51825 1210 aaKnown RBP8.2□□□□□ -1.1
NUP88-205ENST00000572809 COASYQ13057 564 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 SMC1AQ14683 1233 aaKnown RBP8.2□□□□□ -1.1
NUP88-205ENST00000572809 PPP2R5AQ15172 486 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 SMAD2Q15796 467 aaKnown RBP8.2□□□□□ -1.1
NUP88-205ENST00000572809 MAPK6Q16659 721 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 DUSP6Q16828 381 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 FAM187BQ17R55 369 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 PPP1R26Q5T8A7 1209 aaPredicted RBP8.2□□□□□ -1.1
NUP88-205ENST00000572809 ARL6IP4Q66PJ3 421 aaKnown RBP8.2□□□□□ -1.1
NUP88-205ENST00000572809 CDCA2Q69YH5 1023 aaPredicted RBP8.2□□□□□ -1.1
NUP88-205ENST00000572809 SLC27A1Q6PCB7 646 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 TMEM184AQ6ZMB5 413 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 DDX53Q86TM3 631 aaKnown RBP8.2□□□□□ -1.1
NUP88-205ENST00000572809 CDR2LQ86X02 465 aaPredicted RBP8.2□□□□□ -1.1
NUP88-205ENST00000572809 HACE1Q8IYU2 909 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 GJD3Q8N144 294 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 VPS52Q8N1B4 723 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 DEPTORQ8TB45 409 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 BSNDQ8WZ55 320 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 KIFAP3Q92845 792 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 MSLNLQ96KJ4 702 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 IFT74Q96LB3 600 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 PRIMPOLQ96LW4 560 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 GAD1Q99259 594 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 TMEM175Q9BSA9 504 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 CD320Q9NPF0 282 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 MIOSQ9NXC5 875 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 PRKAG3Q9UGI9 489 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 GIT1Q9Y2X7 761 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 HES2Q9Y543 173 aa8.2□□□□□ -1.1
NUP88-205ENST00000572809 SPTBN5Q9NRC6 3674 aaKnown RBP8.19□□□□□ -1.1
NUP88-205ENST00000572809 TTC28Q96AY4 2481 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 VCANP13611 3396 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 VWA3AA6NCI4 1184 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 C2orf71A6NGG8 1288 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 K7ERI5 159 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 ACKR2O00590 384 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 NRP1O14786 923 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 MSTNO14793 375 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 N4BP3O15049 544 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 INPPL1O15357 1258 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 PRMT3O60678 531 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 GLP2RO95838 553 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 LIG1P18858 919 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 PDCP20941 246 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 AKAP5P24588 427 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 CA8P35219 290 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 EFNA5P52803 228 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 RBM10P98175 930 aaKnown RBP8.19□□□□□ -1.1
NUP88-205ENST00000572809 SMAD4Q13485 552 aaKnown RBP8.19□□□□□ -1.1
NUP88-205ENST00000572809 PRPF4BQ13523 1007 aaKnown RBP8.19□□□□□ -1.1
NUP88-205ENST00000572809 KCNC3Q14003 757 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 GIT2Q14161 759 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 ZRSR1Q15695 479 aaKnown RBP8.19□□□□□ -1.1
NUP88-205ENST00000572809 HYIQ5T013 277 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 RINT1Q6NUQ1 792 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms