RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CPB2Q96IY4 423 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 C2orf40Q9H1Z8 148 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 MAGEF1Q9HAY2 307 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 PARVGQ9HBI0 331 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 ARHGEF3Q9NR81 526 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 LARSQ9P2J5 1176 aaKnown RBP14.59□□□□□ -0.07
CCDC40-205ENST00000571028 DPP7Q9UHL4 492 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 USP25Q9UHP3 1055 aa14.59□□□□□ -0.07
CCDC40-205ENST00000571028 MYO10Q9HD67 2058 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 FAM237AA0A1B0GTK4 181 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 K7ENM7 598 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 K7ERI5 159 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 TRAK2O60296 914 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 PRKCBP05771 671 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 SKIP12755 728 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 NMT1P30419 496 aaKnown RBP14.58□□□□□ -0.08
CCDC40-205ENST00000571028 CLCN4P51793 760 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 UBE2HP62256 183 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 FAM160A1Q05DH4 1040 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 CUL4BQ13620 913 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 NOMO2Q5JPE7 1267 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 TWF2Q6IBS0 349 aaKnown RBP14.58□□□□□ -0.08
CCDC40-205ENST00000571028 ZNF598Q86UK7 904 aaKnown RBP14.58□□□□□ -0.08
CCDC40-205ENST00000571028 CCDC65Q8IXS2 484 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 FMR1NBQ8N0W7 255 aaPredicted RBP14.58□□□□□ -0.08
CCDC40-205ENST00000571028 GPR161Q8N6U8 529 aaKnown RBP14.58□□□□□ -0.08
CCDC40-205ENST00000571028 NXPE3Q969Y0 559 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 DNAJC19Q96DA6 116 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 KLHL5Q96PQ7 755 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 TRIM9Q9C026 710 aa14.58□□□□□ -0.08
CCDC40-205ENST00000571028 MRPL17Q9NRX2 175 aaKnown RBP14.58□□□□□ -0.08
CCDC40-205ENST00000571028 CDV3Q9UKY7 258 aaKnown RBP14.58□□□□□ -0.08
CCDC40-205ENST00000571028 EPG5Q9HCE0 2579 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 TSPAN1O60635 241 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 NR1I2O75469 434 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 GALTP07902 379 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 POU5F1BQ06416 359 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 NCBP1Q09161 790 aaKnown RBP14.57□□□□□ -0.08
CCDC40-205ENST00000571028 MAPK6Q16659 721 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 KIAA0319Q5VV43 1072 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 PHLDB3Q6NSJ2 640 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 HAUS6Q7Z4H7 955 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 SLC44A3Q8N4M1 653 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 FEZF2Q8TBJ5 459 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 URGCPQ8TCY9 931 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 GPR152Q8TDT2 470 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 HPS3Q969F9 1004 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 C7orf25Q9BPX7 421 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 C17orf75Q9HAS0 396 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 PIDD1Q9HB75 910 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 MAN1C1Q9NR34 630 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 CHST12Q9NRB3 414 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 TBC1D13Q9NVG8 400 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 CLUHO75153 1309 aa14.57□□□□□ -0.08
CCDC40-205ENST00000571028 CCDC195A0A1B0GUA6 201 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 TTLL13PA6NNM8 815 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 GOLGA6L22H0YM25 854 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 C2CD2LO14523 706 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 URODP06132 367 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 CNPP09543 421 aaKnown RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 GAP43P17677 238 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 STRN3Q13033 797 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 PRPF4BQ13523 1007 aaKnown RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 SNW1Q13573 536 aaKnown RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 ST3GAL2Q16842 350 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 ZC2HC1CQ53FD0 456 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 VARS2Q5ST30 1063 aaKnown RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 CDCA2Q69YH5 1023 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 DCLRE1AQ6PJP8 1040 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 CYP26C1Q6V0L0 522 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 IFNLR1Q8IU57 520 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 ENGASEQ8NFI3 743 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 CMASQ8NFW8 434 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 BCL7CQ8WUZ0 217 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 SPIRE2Q8WWL2 714 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 ERCC4Q92889 916 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 LPPQ93052 612 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 SHDQ96IW2 340 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 FAM193BQ96PV7 902 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 NRDE2Q9H7Z3 1164 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 MRPL44Q9H9J2 332 aaKnown RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 WDR6Q9NNW5 1121 aaKnown RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 PRMT7Q9NVM4 692 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-205ENST00000571028 EPS15L1Q9UBC2 864 aa14.56□□□□□ -0.08
CCDC40-205ENST00000571028 FRYLO94915 3013 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 SPTLC1O15269 473 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 LAMTOR5O43504 91 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 N4BP1O75113 896 aaKnown RBP14.55□□□□□ -0.08
CCDC40-205ENST00000571028 GCNT3O95395 438 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 GLUD1P00367 558 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 ADH1AP07327 375 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 HARSP12081 509 aaKnown RBP14.55□□□□□ -0.08
CCDC40-205ENST00000571028 ARF4P18085 180 aaPredicted RBP14.55□□□□□ -0.08
CCDC40-205ENST00000571028 SLC11A1P49279 550 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 ZNF131P52739 623 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 EFNA5P52803 228 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 LMNB2Q03252 620 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 PNOCQ13519 176 aa14.55□□□□□ -0.08
CCDC40-205ENST00000571028 AMHR2Q16671 573 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms