RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 SPIRE2Q8WWL2 714 aa16.55■□□□□ 0.24
RAB40B-203ENST00000570676 RIN2Q8WYP3 895 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-203ENST00000570676 TARS2Q9BW92 718 aaKnown RBP16.55■□□□□ 0.24
RAB40B-203ENST00000570676 MRPL4Q9BYD3 311 aaKnown RBP16.55■□□□□ 0.24
RAB40B-203ENST00000570676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.55■□□□□ 0.24
RAB40B-203ENST00000570676 FNIP2Q9P278 1114 aa16.55■□□□□ 0.24
RAB40B-203ENST00000570676 A0A087X0B3 334 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 TMEM221A6NGB7 291 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 M0R296 226 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 POLR2DO15514 142 aaKnown RBP16.54■□□□□ 0.24
RAB40B-203ENST00000570676 PLA2G4BP0C869 781 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 PLS3P13797 630 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 RPL17P18621 184 aaKnown RBP16.54■□□□□ 0.24
RAB40B-203ENST00000570676 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
RAB40B-203ENST00000570676 SIGLEC14Q08ET2 396 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 RRAGBQ5VZM2 374 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 PRSS55Q6UWB4 352 aaPredicted RBP16.54■□□□□ 0.24
RAB40B-203ENST00000570676 BMP8AQ7Z5Y6 402 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 FMR1NBQ8N0W7 255 aaPredicted RBP16.54■□□□□ 0.24
RAB40B-203ENST00000570676 TDRD5Q8NAT2 981 aaKnown RBP16.54■□□□□ 0.24
RAB40B-203ENST00000570676 TMEM161BQ8NDZ6 487 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 ENGASEQ8NFI3 743 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 DHX58Q96C10 678 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 ASIC4Q96FT7 647 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 NTPCRQ9BSD7 190 aaKnown RBP16.54■□□□□ 0.24
RAB40B-203ENST00000570676 BLOC1S4Q9NUP1 217 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 KCND2Q9NZV8 630 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 USTQ9Y2C2 406 aa16.54■□□□□ 0.24
RAB40B-203ENST00000570676 NPHP3-ACAD11A0A0J9YXS1 232 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 TMEM189-UBE2V1I3L0A0 370 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 MEFVO15553 781 aaPredicted RBP16.53■□□□□ 0.24
RAB40B-203ENST00000570676 TGM5O43548 720 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 TADA2AO75478 443 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 C1RP00736 705 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 MAPTP10636 758 aaKnown RBP16.53■□□□□ 0.24
RAB40B-203ENST00000570676 PLCG1P19174 1290 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 IGFBP6P24592 240 aaPredicted RBP16.53■□□□□ 0.24
RAB40B-203ENST00000570676 STAT6P42226 847 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 SNW1Q13573 536 aaKnown RBP16.53■□□□□ 0.24
RAB40B-203ENST00000570676 ARSHQ5FYA8 562 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 XKR4Q5GH76 650 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 MPZL3Q6UWV2 235 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 CD300LGQ6UXG3 332 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 CCDC149Q6ZUS6 474 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 APBB1IPQ7Z5R6 666 aaPredicted RBP16.53■□□□□ 0.24
RAB40B-203ENST00000570676 GLYCTKQ8IVS8 523 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 ZDHHC14Q8IZN3 488 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 PIK3R5Q8WYR1 880 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 SNX27Q96L92 541 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 PYM1Q9BRP8 204 aaKnown RBP16.53■□□□□ 0.24
RAB40B-203ENST00000570676 RHOBTB2Q9BYZ6 727 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 GOLGA2P5Q9HBQ8 144 aa16.53■□□□□ 0.24
RAB40B-203ENST00000570676 ANK1P16157 1881 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 SMIM28A0A1B0GU29 152 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 KINO60870 393 aaKnown RBP16.52■□□□□ 0.24
RAB40B-203ENST00000570676 RFPL2O75678 378 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 ZNF202O95125 648 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 MCF2P10911 925 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 NCKAP1LP55160 1127 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 CREMQ03060 361 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 SOX4Q06945 474 aaPredicted RBP16.52■□□□□ 0.24
RAB40B-203ENST00000570676 SKOR2Q2VWA4 1001 aaPredicted RBP16.52■□□□□ 0.24
RAB40B-203ENST00000570676 FAM171A1Q5VUB5 890 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 LILRA6Q6PI73 481 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 ALKAL1Q6UXT8 129 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 ZBTB33Q86T24 672 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 IQUBQ8NA54 791 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 KREMEN2Q8NCW0 462 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 C3orf58Q8NDZ4 430 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 HDAC7Q8WUI4 952 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 KCNN1Q92952 543 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 ZNF707Q96C28 371 aaPredicted RBP16.52■□□□□ 0.24
RAB40B-203ENST00000570676 FAM122AQ96E09 287 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 REEP2Q9BRK0 252 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 TTPALQ9BTX7 342 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 CCDC94Q9BW85 323 aaPredicted RBP16.52■□□□□ 0.24
RAB40B-203ENST00000570676 SORCS3Q9UPU3 1222 aa16.52■□□□□ 0.24
RAB40B-203ENST00000570676 DOCK6Q96HP0 2047 aa16.52■□□□□ 0.23
RAB40B-203ENST00000570676 ASGR2P07307 311 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 SPATA31D3P0C874 917 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 MYBP10242 640 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 CLCNKBP51801 687 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 OSTNP61366 133 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 ELAVL2Q12926 359 aaKnown RBP16.51■□□□□ 0.23
RAB40B-203ENST00000570676 NOLC1Q14978 699 aaKnown RBP eCLIP16.51■□□□□ 0.23
RAB40B-203ENST00000570676 E2F4Q16254 413 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 PSMD5Q16401 504 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 UPP1Q16831 310 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.51■□□□□ 0.23
RAB40B-203ENST00000570676 SPATA31D4Q6ZUB0 917 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 GPBP1Q86WP2 473 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 PALB2Q86YC2 1186 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 LNX1Q8TBB1 728 aaPredicted RBP16.51■□□□□ 0.23
RAB40B-203ENST00000570676 ZBTB45Q96K62 511 aaPredicted RBP16.51■□□□□ 0.23
RAB40B-203ENST00000570676 UROC1Q96N76 676 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 ZMAT2Q96NC0 199 aaKnown RBP16.51■□□□□ 0.23
RAB40B-203ENST00000570676 CLSTN3Q9BQT9 956 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 SMOC2Q9H3U7 446 aa16.51■□□□□ 0.23
RAB40B-203ENST00000570676 PLEKHA4Q9H4M7 779 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms