RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 GLRA4Q5JXX5 417 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PRSS55Q6UWB4 352 aaPredicted RBP18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 RAD54LQ92698 747 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PRRX2Q99811 253 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 REEP2Q9BRK0 252 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PRKD2Q9BZL6 878 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 MTRRQ9UBK8 725 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 BACE2Q9Y5Z0 518 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 CLUHO75153 1309 aa18.7■□□□□ 0.58
MAP1LC3B-208ENST00000570189 VPS37CA5D8V6 355 aaPredicted RBP18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 MEFVO15553 781 aaPredicted RBP18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 RFPL2O75678 378 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ZMYND10O75800 440 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 B3GAT3O94766 335 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 HNRNPA1P09651 372 aaKnown RBP eCLIP18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PLCG1P19174 1290 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SYT1P21579 422 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 RPL9P32969 192 aaKnown RBP18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 GRIN1Q05586 938 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SOX4Q06945 474 aaPredicted RBP18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 RAD51AP2Q09MP3 1159 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 RESTQ13127 1097 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 RAB33AQ14088 237 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 KYAT1Q16773 422 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 HAUS6Q7Z4H7 955 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 GPBP1Q86WP2 473 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PALB2Q86YC2 1186 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 C3orf58Q8NDZ4 430 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 HASPINQ8TF76 798 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SMG7Q92540 1137 aaKnown RBP18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 LARP4BQ92615 738 aaKnown RBP18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ZMAT2Q96NC0 199 aaKnown RBP18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 TSPAN18Q96SJ8 248 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PLIN2Q99541 437 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 TCHPQ9BT92 498 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PLEKHA5Q9HAU0 1116 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PARVGQ9HBI0 331 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 IGSF9Q9P2J2 1179 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 EPS15L1Q9UBC2 864 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ANK1P16157 1881 aa18.69■□□□□ 0.58
MAP1LC3B-208ENST00000570189 NOTCH4Q99466 2003 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 CLDN3O15551 220 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 N4BP1O75113 896 aaKnown RBP18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 RPL17P18621 184 aaKnown RBP18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 DDIT3P35638 169 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 NUBP1P53384 320 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 KARSQ15046 597 aaKnown RBP18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 UVSSAQ2YD98 709 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ANKS3Q6ZW76 656 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ZBTB33Q86T24 672 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 NXPE3Q969Y0 559 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ZBTB45Q96K62 511 aaPredicted RBP18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 FIZ1Q96SL8 496 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ST6GALNAC4Q9H4F1 302 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 STK17AQ9UEE5 414 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 LIMD1Q9UGP4 676 aa18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 FBXO2Q9UK22 296 aaPredicted RBP18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SRPRBQ9Y5M8 271 aaKnown RBP18.68■□□□□ 0.58
MAP1LC3B-208ENST00000570189 NPHP3-ACAD11A0A0J9YXS1 232 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SYN3O14994 580 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 FAM189A1O60320 539 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ADRB2P07550 413 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 HOXD11P31277 338 aaPredicted RBP18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SLC10A6Q3KNW5 377 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SUGP1Q8IWZ8 645 aaKnown RBP18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 HAPLN2Q9GZV7 340 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ZSCAN16Q9H4T2 348 aaPredicted RBP18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 GOLGA2P5Q9HBQ8 144 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 TBX20Q9UMR3 447 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 CLIC4Q9Y696 253 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ZFP37Q9Y6Q3 630 aaPredicted RBP18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PIEZO1Q92508 2521 aa18.67■□□□□ 0.58
MAP1LC3B-208ENST00000570189 TTC26A0AVF1 554 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 K7ELQ4 463 aaPredicted RBP18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 PODXLO00592 558 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 CLTAP09496 248 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SPATA31D3P0C874 917 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 OSTNP61366 133 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 GTF2BQ00403 316 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 MCM6Q14566 821 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SLC8B1Q6J4K2 584 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SPATA31D4Q6ZUB0 917 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 CEP57Q86XR8 500 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ANKFY1Q9P2R3 1169 aa18.66■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ADAM12O43184 909 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 TRAK2O60296 914 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 TBC1D4O60343 1298 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 FAM13AO94988 1023 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ASGR2P07307 311 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 CYP3A5P20815 502 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 IGFBP6P24592 240 aaPredicted RBP18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 TKTP29401 623 aaKnown RBP18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 CACNB1Q02641 598 aaPredicted RBP18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 TDGQ13569 410 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 MRPL58Q14197 206 aaKnown RBP18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 ZBTB6Q15916 424 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 LIN9Q5TKA1 542 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 MAP4K3Q8IVH8 894 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 GLYCTKQ8IVS8 523 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms