RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 DDX53Q86TM3 631 aaKnown RBP10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 SYCP3Q8IZU3 236 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 KIAA0895Q8NCT3 520 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 SCFD1Q8WVM8 642 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 POMGNT1Q8WZA1 660 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 CCDC34Q96HJ3 373 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 TCF25Q9BQ70 676 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 VN1R3Q9BXE9 311 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 SLC39A2Q9NP94 309 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 CPSF3Q9UKF6 684 aaKnown RBP10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 AGO2Q9UKV8 859 aaKnown RBP10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 PCDHGC5Q9Y5F6 944 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 TDRD15B5MCY1 1934 aaKnown RBP10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 ATG2AQ2TAZ0 1938 aa10.45□□□□□ -0.74
HCCAT5-201ENST00000569990 PRUNE2Q8WUY3 3088 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 RHOBTB3O94955 611 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 EFEMP2O95967 443 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 ADRB2P07550 413 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 ACOT2P49753 483 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 PPP2R3AQ06190 1150 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 SOX4Q06945 474 aaPredicted RBP10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 STK4Q13043 487 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 PSMD2Q13200 908 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 HSP90AA2PQ14568 343 aaPredicted RBP10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 CRELD2Q6UXH1 353 aaPredicted RBP10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 CLEC17AQ6ZS10 378 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 TMC7Q7Z402 723 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 ADGRD2Q7Z7M1 963 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 NELFCDQ8IXH7 590 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 RNF168Q8IYW5 571 aaPredicted RBP10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 VPS52Q8N1B4 723 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 MICAL1Q8TDZ2 1067 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 RABGGTAQ92696 567 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 TIGD1Q96MW7 591 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 CBWD1Q9BRT8 395 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 COLEC11Q9BWP8 271 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 ZBP1Q9H171 429 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 RPF1Q9H9Y2 349 aaKnown RBP10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 GOLGA2P5Q9HBQ8 144 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 NGRNQ9NPE2 291 aaKnown RBP10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 ENTPD7Q9NQZ7 604 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 SLC38A7Q9NVC3 462 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 STK39Q9UEW8 545 aa10.44□□□□□ -0.74
HCCAT5-201ENST00000569990 LACTBL1A8MY62 500 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 TGFB1I1O43294 461 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 KIF4AO95239 1232 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 CTSAP10619 480 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 UBE2HP62256 183 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 POU5F1Q01860 360 aaKnown RBP10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 HYAL1Q12794 435 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 PNOCQ13519 176 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 KCNB1Q14721 858 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 COL19A1Q14993 1142 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 SKIV2LQ15477 1246 aaKnown RBP10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 ZBTB6Q15916 424 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 UPP1Q16831 310 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 PLPP4Q5VZY2 271 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 ARMCX5Q6P1M9 558 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 FUT10Q6P4F1 479 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 MRPL43Q8N983 215 aaKnown RBP10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 ZSWIM2Q8NEG5 633 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 PPP2R3CQ969Q6 453 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 CCDC47Q96A33 483 aaKnown RBP10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 C18orf25Q96B23 403 aaPredicted RBP10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 SAAL1Q96ER3 474 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 UROC1Q96N76 676 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 FAM213AQ9BRX8 229 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 PRDM6Q9NQX0 595 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 AGPAT3Q9NRZ7 376 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 ADAM28Q9UKQ2 775 aa10.43□□□□□ -0.74
HCCAT5-201ENST00000569990 CITO14578 2027 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 HIDE1A8MVS5 230 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 TMEM189-UBE2V1I3L0A0 370 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 KIAA0391O15091 583 aaKnown RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 EXTL3O43909 919 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 KINO60870 393 aaKnown RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 PRPF40AO75400 957 aaKnown RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 TADA2AO75478 443 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 B3GAT3O94766 335 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 LDHAP00338 332 aaKnown RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 SOD2P04179 222 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 IGFBP6P24592 240 aaPredicted RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 GTF2F1P35269 517 aaKnown RBP eCLIP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 CLCNKBP51801 687 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 SNRPFP62306 86 aaKnown RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 SPAG1Q07617 926 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 SMC1AQ14683 1233 aaKnown RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 KNOP1Q1ED39 458 aaKnown RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 JADE1Q6IE81 842 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 DCLRE1AQ6PJP8 1040 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 HS2ST1Q7LGA3 356 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 TAS1R1Q7RTX1 841 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 CD302Q8IX05 232 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 ELOA2Q8IYF1 753 aaPredicted RBP10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 C3orf58Q8NDZ4 430 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 SPATA20Q8TB22 786 aa10.42□□□□□ -0.74
HCCAT5-201ENST00000569990 HASPINQ8TF76 798 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms