RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ME1P48163 572 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 UPP1Q16831 310 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 TPRNQ4KMQ1 711 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 RTP2Q5QGT7 225 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 KIAA1841Q6NSI8 718 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 CD300LGQ6UXG3 332 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 ZNF720Q7Z2F6 126 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 GPR65Q8IYL9 337 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 C3orf58Q8NDZ4 430 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 STAMQ92783 540 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 DHX58Q96C10 678 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 HVCN1Q96D96 273 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 UROC1Q96N76 676 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 STRA6Q9BX79 667 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 OLFML3Q9NRN5 406 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 SLC38A7Q9NVC3 462 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 DZANK1Q9NVP4 752 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 KBTBD4Q9NVX7 518 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 CDH22Q9UJ99 828 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 RCOR1Q9UKL0 485 aa14.23□□□□□ -0.13
CNOT1-220ENST00000569916 A0A0B4J269 797 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 TISP43B9A030 160 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 ANKRD63C9JTQ0 380 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 OGTO15294 1046 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 B3GAT3O94766 335 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 ADH1AP07327 375 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 CLTAP09496 248 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 IDEP14735 1019 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 CASP5P51878 434 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 CBX2Q14781 532 aaPredicted RBP14.22□□□□□ -0.13
CNOT1-220ENST00000569916 ZBTB41Q5SVQ8 909 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 FAM171A1Q5VUB5 890 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 RESP18Q5W5W9 173 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 RIN2Q8WYP3 895 aaPredicted RBP14.22□□□□□ -0.13
CNOT1-220ENST00000569916 C18orf25Q96B23 403 aaPredicted RBP14.22□□□□□ -0.13
CNOT1-220ENST00000569916 CHAMP1Q96JM3 812 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 FBXL18Q96ME1 805 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 POP1Q99575 1024 aaKnown RBP14.22□□□□□ -0.13
CNOT1-220ENST00000569916 FGFBP2Q9BYJ0 223 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 IKZF4Q9H2S9 585 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 ADAM7Q9H2U9 754 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 CUEDC2Q9H467 287 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 MRPL44Q9H9J2 332 aaKnown RBP14.22□□□□□ -0.13
CNOT1-220ENST00000569916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.22□□□□□ -0.13
CNOT1-220ENST00000569916 TBC1D7Q9P0N9 293 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 FNIP2Q9P278 1114 aa14.22□□□□□ -0.13
CNOT1-220ENST00000569916 TSC2P49815 1807 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 TTC26A0AVF1 554 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 PODXLO00592 558 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 ITIH3Q06033 890 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 KCNA1Q09470 495 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 ELAVL2Q12926 359 aaKnown RBP14.21□□□□□ -0.13
CNOT1-220ENST00000569916 ENOX2Q16206 610 aaKnown RBP14.21□□□□□ -0.13
CNOT1-220ENST00000569916 KYAT1Q16773 422 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 RARS2Q5T160 578 aaKnown RBP14.21□□□□□ -0.13
CNOT1-220ENST00000569916 KANK3Q6NY19 840 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 DCLRE1AQ6PJP8 1040 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 PRSS55Q6UWB4 352 aaPredicted RBP14.21□□□□□ -0.13
CNOT1-220ENST00000569916 C12orf76Q8N812 135 aaPredicted RBP14.21□□□□□ -0.13
CNOT1-220ENST00000569916 IQUBQ8NA54 791 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 FEZF2Q8TBJ5 459 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 PIK3R5Q8WYR1 880 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 TTPALQ9BTX7 342 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 MSTO1Q9BUK6 570 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 PHF7Q9BWX1 381 aaPredicted RBP14.21□□□□□ -0.13
CNOT1-220ENST00000569916 TRIM9Q9C026 710 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 PLEKHA5Q9HAU0 1116 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 PANK4Q9NVE7 773 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 TUBGCP4Q9UGJ1 667 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 CPSF3Q9UKF6 684 aaKnown RBP14.21□□□□□ -0.13
CNOT1-220ENST00000569916 STYXL1Q9Y6J8 313 aa14.21□□□□□ -0.13
CNOT1-220ENST00000569916 LOC730098B7Z3J9 87 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 POLR2DO15514 142 aaKnown RBP14.2□□□□□ -0.14
CNOT1-220ENST00000569916 GCNT3O95395 438 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 GLUD1P00367 558 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 ADRB2P07550 413 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 MYBP10242 640 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 RPL17P18621 184 aaKnown RBP14.2□□□□□ -0.14
CNOT1-220ENST00000569916 FGFR3P22607 806 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 BRCC3P46736 316 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 KRT85P78386 507 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 CREMQ03060 361 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 PPP2R3AQ06190 1150 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 SPAG1Q07617 926 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 BECN1Q14457 450 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 PSMD5Q16401 504 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 HERC4Q5GLZ8 1057 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-220ENST00000569916 L1TD1Q5T7N2 865 aaKnown RBP14.2□□□□□ -0.14
CNOT1-220ENST00000569916 CES5AQ6NT32 575 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-220ENST00000569916 CEP57Q86XR8 500 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 GLYCTKQ8IVS8 523 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 CCDC65Q8IXS2 484 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 TMEM130Q8N3G9 435 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 LNX1Q8TBB1 728 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-220ENST00000569916 LEO1Q8WVC0 666 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-220ENST00000569916 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
CNOT1-220ENST00000569916 LRRC27Q9C0I9 530 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 SFXN1Q9H9B4 322 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 MAGEF1Q9HAY2 307 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms