RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 TREHO43280 583 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 TACC1O75410 805 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 ERLIN2O94905 339 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 IL18RAPO95256 599 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 CLTAP09496 248 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 CXCL8P10145 99 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 OSTNP61366 133 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 ZNF200P98182 395 aaPredicted RBP24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 TMEM62Q0P6H9 643 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 NCOA4Q13772 614 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 U2AF1L4Q8WU68 220 aaKnown RBP24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 DHX38Q92620 1227 aaKnown RBP24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 ARID3AQ99856 593 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 GCOM2Q9BZD3 368 aaPredicted RBP24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 CDHR5Q9HBB8 845 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 MYH10P35580 1976 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 C17orf102A2RUQ5 167 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 CYP26A1O43174 497 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 SGPL1O95470 568 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 STAG3L1P0CL83 205 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 USP8P40818 1118 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 TUBB2AQ13885 445 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 DUOXA2Q1HG44 320 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 GNASQ5JWF2 1037 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 SCARA3Q6AZY7 606 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 SPOPLQ6IQ16 392 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 TRAPPC11Q7Z392 1133 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 PALB2Q86YC2 1186 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 LRRN4CLQ8ND94 238 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 FAM212AQ96EL1 285 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 ERO1AQ96HE7 468 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 NOX5Q96PH1 765 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 MTG1Q9BT17 334 aaPredicted RBP24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 TUBB2BQ9BVA1 445 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 RPF1Q9H9Y2 349 aaKnown RBP24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 CDC23Q9UJX2 597 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 NOP14P78316 857 aaKnown RBP24.25■■□□□ 1.47
VCPKMT-205ENST00000569518 PCBP1Q15365 356 aaKnown RBP eCLIP24.25■■□□□ 1.47
VCPKMT-205ENST00000569518 KYAT1Q16773 422 aa24.25■■□□□ 1.47
VCPKMT-205ENST00000569518 PAPD7Q5XG87 772 aaKnown RBP24.25■■□□□ 1.47
VCPKMT-205ENST00000569518 NOP9Q86U38 636 aaKnown RBP24.25■■□□□ 1.47
VCPKMT-205ENST00000569518 DNAJB3Q8WWF6 145 aa24.25■■□□□ 1.47
VCPKMT-205ENST00000569518 PHACTR2O75167 634 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 ADAMTS4O75173 837 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 PGK1P00558 417 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 ASS1P00966 412 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 ATP1A1P05023 1023 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 RARBP10826 455 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 DARSP14868 501 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 CHRNB2P17787 502 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 TNFAIP3P21580 790 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 HOXA11P31270 313 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 SLC47A2Q86VL8 602 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 C7orf31Q8N865 590 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 TSC1Q92574 1164 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 H2AFZP0C0S5 128 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 GNAT1P11488 350 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 ACO1P21399 889 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 FGFR4P22455 802 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 CUL2Q13617 745 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 H2AFVQ71UI9 128 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 DNAAF5Q86Y56 855 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 ALS2CR12Q96Q35 445 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 OSMRQ99650 979 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 ACP6Q9NPH0 428 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 SRRDQ9UH36 339 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 NUB1Q9Y5A7 615 aa24.24■■□□□ 1.47
VCPKMT-205ENST00000569518 ENC1O14682 589 aa24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 TRPA1O75762 1119 aa24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 CST3P01034 146 aaPredicted RBP24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 PRKAR2AP13861 404 aaKnown RBP24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 ELNP15502 786 aa24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 CYP11B1P15538 503 aa24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 UMODL1Q5DID0 1318 aa24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 CARD6Q9BX69 1037 aa24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 THSD7BQ9C0I4 1608 aa24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 JRKLQ9Y4A0 524 aa24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 PCDHGC5Q9Y5F6 944 aa24.23■■□□□ 1.47
VCPKMT-205ENST00000569518 BUB1O43683 1085 aa24.22■■□□□ 1.47
VCPKMT-205ENST00000569518 CCND3P30281 292 aaPredicted RBP24.22■■□□□ 1.47
VCPKMT-205ENST00000569518 TFAMQ00059 246 aaKnown RBP24.22■■□□□ 1.47
VCPKMT-205ENST00000569518 CXCL17Q6UXB2 119 aa24.22■■□□□ 1.47
VCPKMT-205ENST00000569518 RPUSD2Q8IZ73 545 aaKnown RBP24.22■■□□□ 1.47
VCPKMT-205ENST00000569518 DDX1Q92499 740 aaKnown RBP24.22■■□□□ 1.47
VCPKMT-205ENST00000569518 SPC25Q9HBM1 224 aa24.22■■□□□ 1.47
VCPKMT-205ENST00000569518 GINS2Q9Y248 185 aa24.22■■□□□ 1.47
VCPKMT-205ENST00000569518 PCNTO95613 3336 aa24.22■■□□□ 1.47
VCPKMT-205ENST00000569518 A0A0A6YYK5 440 aaPredicted RBP24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 LACTBL1A8MY62 500 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 EIF4BP23588 611 aaKnown RBP24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 TBXAS1P24557 533 aaPredicted RBP24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 MAP2K2P36507 400 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 GALCP54803 685 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 SLC10A6Q3KNW5 377 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 DCAF4L1Q3SXM0 396 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 ZNF710Q8N1W2 664 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 CD99L2Q8TCZ2 262 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 ADPGKQ9BRR6 497 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 ASB7Q9H672 318 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 TAS2R14Q9NYV8 317 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms