RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 JADE1Q6IE81 842 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 PDE12Q6L8Q7 609 aaKnown RBP13.93□□□□□ -0.18
CDT1-203ENST00000569140 FUT10Q6P4F1 479 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 ALKAL1Q6UXT8 129 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 EPM2AIP1Q7L775 607 aaPredicted RBP13.93□□□□□ -0.18
CDT1-203ENST00000569140 CEP57Q86XR8 500 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 KIAA0895Q8NCT3 520 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 ENGASEQ8NFI3 743 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 ZNF507Q8TCN5 953 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 SMARCE1Q969G3 411 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 UROC1Q96N76 676 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 PLEKHA5Q9HAU0 1116 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 NGRNQ9NPE2 291 aaKnown RBP13.93□□□□□ -0.18
CDT1-203ENST00000569140 RMND1Q9NWS8 449 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 CLDND1Q9NY35 253 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 RBAKQ9NYW8 714 aaPredicted RBP13.93□□□□□ -0.18
CDT1-203ENST00000569140 TUBGCP4Q9UGJ1 667 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 CPSF3Q9UKF6 684 aaKnown RBP13.93□□□□□ -0.18
CDT1-203ENST00000569140 MAPK8IP1Q9UQF2 711 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 STYXL1Q9Y6J8 313 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 CDH23Q9H251 3354 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 SF3B1O75533 1304 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDT1-203ENST00000569140 FSCN2O14926 492 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 MEFVO15553 781 aaPredicted RBP13.92□□□□□ -0.18
CDT1-203ENST00000569140 FAM189A1O60320 539 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 B3GAT3O94766 335 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 KIF20AO95235 890 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 CXCL14O95715 111 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 LDHAP00338 332 aaKnown RBP13.92□□□□□ -0.18
CDT1-203ENST00000569140 NFICP08651 508 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 KCNE1P15382 129 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 GTF2F1P35269 517 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDT1-203ENST00000569140 GLUD2P49448 558 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 TMEM132DQ14C87 1099 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 KNOP1Q1ED39 458 aaKnown RBP13.92□□□□□ -0.18
CDT1-203ENST00000569140 CD302Q8IX05 232 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 GPD1LQ8N335 351 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 ZSWIM2Q8NEG5 633 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 B3GALT6Q96L58 329 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 TIGD1Q96MW7 591 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 HERC2P3Q9BVR0 1158 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 ZBP1Q9H171 429 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 AGPAT3Q9NRZ7 376 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 HSPBP1Q9NZL4 362 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 THEGQ9P2T0 379 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 STK39Q9UEW8 545 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 UBQLN1Q9UMX0 589 aaKnown RBP13.92□□□□□ -0.18
CDT1-203ENST00000569140 NUB1Q9Y5A7 615 aa13.92□□□□□ -0.18
CDT1-203ENST00000569140 TTC26A0AVF1 554 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 HIDE1A8MVS5 230 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 GOLGA6L22H0YM25 854 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 EXTL3O43909 919 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 RHOBTB3O94955 611 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 SOD2P04179 222 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 CTSAP10619 480 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 MCM4P33991 863 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 HOXD13P35453 343 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 NDUFV1P49821 464 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 GUCY2FP51841 1108 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 HYAL1Q12794 435 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 KCNB1Q14721 858 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 NAB2Q15742 525 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 XKR4Q5GH76 650 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 LLGL2Q6P1M3 1020 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 TMEM130Q8N3G9 435 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 RDH13Q8NBN7 331 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 BEST2Q8NFU1 509 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 HLA-CQ95604 372 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 DDX27Q96GQ7 796 aaKnown RBP13.91□□□□□ -0.18
CDT1-203ENST00000569140 VN1R3Q9BXE9 311 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 GPR62Q9BZJ7 368 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 MRPL17Q9NRX2 175 aaKnown RBP13.91□□□□□ -0.18
CDT1-203ENST00000569140 TRIP11Q15643 1979 aa13.91□□□□□ -0.18
CDT1-203ENST00000569140 C2orf71A6NGG8 1288 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 I3L4J1 428 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 KIAA0391O15091 583 aaKnown RBP13.9□□□□□ -0.18
CDT1-203ENST00000569140 LINC01565O15544 149 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 CALUO43852 315 aaPredicted RBP13.9□□□□□ -0.18
CDT1-203ENST00000569140 IL18RAPO95256 599 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 SRGAP2BP0DMP2 458 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 KCNA5P22460 613 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 TFAMQ00059 246 aaKnown RBP13.9□□□□□ -0.18
CDT1-203ENST00000569140 UPP1Q16831 310 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 BMT2Q1RMZ1 405 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 USP41Q3LFD5 358 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 FAM171A1Q5VUB5 890 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 ISM2Q6H9L7 571 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 DCLRE1AQ6PJP8 1040 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 CRELD2Q6UXH1 353 aaPredicted RBP13.9□□□□□ -0.18
CDT1-203ENST00000569140 TAS1R1Q7RTX1 841 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 BRSK2Q8IWQ3 736 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 SMYD4Q8IYR2 804 aaPredicted RBP13.9□□□□□ -0.18
CDT1-203ENST00000569140 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 EMILIN2Q9BXX0 1053 aa13.9□□□□□ -0.18
CDT1-203ENST00000569140 PDCD11Q14690 1871 aaKnown RBP13.9□□□□□ -0.18
CDT1-203ENST00000569140 PRRC2BQ5JSZ5 2229 aaKnown RBP13.89□□□□□ -0.19
CDT1-203ENST00000569140 ZNF233A6NK53 670 aa13.89□□□□□ -0.19
CDT1-203ENST00000569140 TGFB1I1O43294 461 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms