RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 DAAM1Q9Y4D1 1078 aa7.61□□□□□ -1.19
SMG1-215ENST00000568239 GPR25O00155 361 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 TREHO43280 583 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 NCK2O43639 380 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 TRPA1O75762 1119 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 PALMO75781 387 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 VNN1O95497 513 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 FTCDO95954 541 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 CST3P01034 146 aaPredicted RBP7.6□□□□□ -1.19
SMG1-215ENST00000568239 CXCR5P32302 372 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 PDE6CP51160 858 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 CLDN10P78369 228 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 NCBP1Q09161 790 aaKnown RBP7.6□□□□□ -1.19
SMG1-215ENST00000568239 KIF22Q14807 665 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 DUOXA2Q1HG44 320 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 FAM47CQ5HY64 1035 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 C10orf76Q5T2E6 689 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 SCARA3Q6AZY7 606 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 LINC01465Q8N7H1 131 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 VTI1AQ96AJ9 217 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 ADPGKQ9BRR6 497 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 PDCL3Q9H2J4 239 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 TAS2R14Q9NYV8 317 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 TNFSF13BQ9Y275 285 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 JRKLQ9Y4A0 524 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 HTTP42858 3142 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 ZSWIM8A7E2V4 1837 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 ZNF236Q9UL36 1845 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 MYADML2A6NDP7 307 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 ABLIM1O14639 778 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 ZNF185O15231 689 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 FAM189A1O60320 539 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 STAG3L1P0CL83 205 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 GALCP54803 685 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 NOP14P78316 857 aaKnown RBP7.6□□□□□ -1.19
SMG1-215ENST00000568239 TRIM32Q13049 653 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 CXCL17Q6UXB2 119 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 RUFY4Q6ZNE9 571 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 C15orf39Q6ZRI6 1047 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 CATSPER4Q7RTX7 472 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 TRAPPC11Q7Z392 1133 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 NOP9Q86U38 636 aaKnown RBP7.6□□□□□ -1.19
SMG1-215ENST00000568239 WDR49Q8IV35 697 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 FAM71AQ8IYT1 594 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 RNF10Q8N5U6 811 aaKnown RBP7.6□□□□□ -1.19
SMG1-215ENST00000568239 TRPV1Q8NER1 839 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 CTNNBL1Q8WYA6 563 aaPredicted RBP7.6□□□□□ -1.19
SMG1-215ENST00000568239 SHC3Q92529 594 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 NFKBIZQ9BYH8 718 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 GOLPH3Q9H4A6 298 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 PTPRHQ9HD43 1115 aa7.6□□□□□ -1.19
SMG1-215ENST00000568239 ZC3H11AO75152 810 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMG1-215ENST00000568239 TNNC2P02585 160 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 MMEP08473 750 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 ELNP15502 786 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 CYP11B1P15538 503 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 PROZP22891 400 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 SP3Q02447 781 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 GCNT1Q02742 428 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 TMEM270Q6UE05 265 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 EPS8L1Q8TE68 723 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 ANKRD36BP1Q96IX9 119 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 HHIPL1Q96JK4 782 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 KATNAL1Q9BW62 490 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 GCOM2Q9BZD3 368 aaPredicted RBP7.59□□□□□ -1.19
SMG1-215ENST00000568239 PDZD7Q9H5P4 517 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 CDHR5Q9HBB8 845 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 SPC25Q9HBM1 224 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 APOBEC3GQ9HC16 384 aaKnown RBP7.59□□□□□ -1.19
SMG1-215ENST00000568239 PACSIN2Q9UNF0 486 aaPredicted RBP7.59□□□□□ -1.19
SMG1-215ENST00000568239 PCDHB4Q9Y5E5 795 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 MGAMO43451 1857 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 C17orf102A2RUQ5 167 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 TSPAN1O60635 241 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 DUSP11O75319 330 aaKnown RBP7.59□□□□□ -1.19
SMG1-215ENST00000568239 FTLP02792 175 aaPredicted RBP7.59□□□□□ -1.19
SMG1-215ENST00000568239 CD58P19256 250 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 ANXA13P27216 316 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 SSTR3P32745 418 aaPredicted RBP7.59□□□□□ -1.19
SMG1-215ENST00000568239 MYL6P60660 151 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 POU5F1BQ06416 359 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 ENPEPQ07075 957 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 HIC1Q14526 733 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 SURF1Q15526 300 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 AMHR2Q16671 573 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 ZNF394Q53GI3 561 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 SCARA5Q6ZMJ2 495 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 ENOSF1Q7L5Y1 443 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 ZNF410Q86VK4 478 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 EFCAB13Q8IY85 973 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 CEP112Q8N8E3 955 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 SLC30A5Q8TAD4 765 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 THAP2Q9H0W7 228 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 EPC1Q9H2F5 836 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 NXF1Q9UBU9 619 aaKnown RBP7.59□□□□□ -1.19
SMG1-215ENST00000568239 CHORDC1Q9UHD1 332 aaPredicted RBP7.59□□□□□ -1.19
SMG1-215ENST00000568239 NUB1Q9Y5A7 615 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 UMODL1Q5DID0 1318 aa7.59□□□□□ -1.19
SMG1-215ENST00000568239 ANO9A1A5B4 782 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 CTAGE15A4D2H0 777 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms