RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 CLCNKBP51801 687 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 WNT7BP56706 349 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
CLK3-220ENST00000567992 TFF2Q03403 129 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 FAM160A1Q05DH4 1040 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 SPAG1Q07617 926 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 STK4Q13043 487 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 KCNC3Q14003 757 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 SMC1AQ14683 1233 aaKnown RBP10.68□□□□□ -0.7
CLK3-220ENST00000567992 ZBTB6Q15916 424 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 KYAT1Q16773 422 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 DUSP6Q16828 381 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 UPP1Q16831 310 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 SLFN12LQ6IEE8 588 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 PDE12Q6L8Q7 609 aaKnown RBP10.68□□□□□ -0.7
CLK3-220ENST00000567992 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLK3-220ENST00000567992 VPS52Q8N1B4 723 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 VN1R2Q8NFZ6 395 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 PABPC5Q96DU9 382 aaKnown RBP10.68□□□□□ -0.7
CLK3-220ENST00000567992 GPR62Q9BZJ7 368 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 TMEM206Q9H813 350 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 UBE2ZQ9H832 354 aaPredicted RBP10.68□□□□□ -0.7
CLK3-220ENST00000567992 PLEKHA5Q9HAU0 1116 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 SLC39A2Q9NP94 309 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 NGRNQ9NPE2 291 aaKnown RBP10.68□□□□□ -0.7
CLK3-220ENST00000567992 THEGQ9P2T0 379 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 PUF60Q9UHX1 559 aaKnown RBP10.68□□□□□ -0.7
CLK3-220ENST00000567992 ADAM28Q9UKQ2 775 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 AGO2Q9UKV8 859 aaKnown RBP10.68□□□□□ -0.7
CLK3-220ENST00000567992 EXOC7Q9UPT5 735 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 IRAK3Q9Y616 596 aa10.68□□□□□ -0.7
CLK3-220ENST00000567992 BDP1A6H8Y1 2624 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 NR1I2O75469 434 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 RPN1P04843 607 aaKnown RBP10.67□□□□□ -0.7
CLK3-220ENST00000567992 NFICP08651 508 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 GARTP22102 1010 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 NRIP1P48552 1158 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 PPP2R3AQ06190 1150 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 DLX2Q07687 328 aaPredicted RBP10.67□□□□□ -0.7
CLK3-220ENST00000567992 SKIV2LQ15477 1246 aaKnown RBP10.67□□□□□ -0.7
CLK3-220ENST00000567992 KIAA0319Q5VV43 1072 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 FUT10Q6P4F1 479 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 STXBP4Q6ZWJ1 553 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 TMC7Q7Z402 723 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 EFHBQ8N7U6 833 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 MRPL43Q8N983 215 aaKnown RBP10.67□□□□□ -0.7
CLK3-220ENST00000567992 HASPINQ8TF76 798 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 POMGNT1Q8WZA1 660 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 SAAL1Q96ER3 474 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 B3GALT6Q96L58 329 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 UROC1Q96N76 676 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 COLEC11Q9BWP8 271 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 CHST7Q9NS84 486 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 SLC38A7Q9NVC3 462 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 COG5Q9UP83 839 aa10.67□□□□□ -0.7
CLK3-220ENST00000567992 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.66□□□□□ -0.7
CLK3-220ENST00000567992 GOLGA6L4A6NEF3 574 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 PODXLO00592 558 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 PER2O15055 1255 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 CLASP2O75122 1294 aaKnown RBP10.66□□□□□ -0.7
CLK3-220ENST00000567992 RHOBTB3O94955 611 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 LRPAP1P30533 357 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 GUCY2FP51841 1108 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 POU5F1Q01860 360 aaKnown RBP10.66□□□□□ -0.7
CLK3-220ENST00000567992 DSG1Q02413 1049 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 PSMD2Q13200 908 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 ADAM15Q13444 863 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 PNOCQ13519 176 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 KCNB1Q14721 858 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 POSTNQ15063 836 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 RTP2Q5QGT7 225 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 RBM23Q86U06 439 aaKnown RBP10.66□□□□□ -0.7
CLK3-220ENST00000567992 BRSK2Q8IWQ3 736 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 NELFCDQ8IXH7 590 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 EFCAB13Q8IY85 973 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 SYCP3Q8IZU3 236 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 MICAL1Q8TDZ2 1067 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 HLA-CQ95604 372 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 FBXL18Q96ME1 805 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 TIGD1Q96MW7 591 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 IPO9Q96P70 1041 aaKnown RBP10.66□□□□□ -0.7
CLK3-220ENST00000567992 IGFLR1Q9H665 355 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 TLE6Q9H808 572 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 RPF1Q9H9Y2 349 aaKnown RBP10.66□□□□□ -0.7
CLK3-220ENST00000567992 AGPAT3Q9NRZ7 376 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 EXOC1Q9NV70 894 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 CLDND1Q9NY35 253 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 CLEC1BQ9P126 229 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 STK39Q9UEW8 545 aa10.66□□□□□ -0.7
CLK3-220ENST00000567992 TTC28Q96AY4 2481 aa10.65□□□□□ -0.7
CLK3-220ENST00000567992 SF3B1O75533 1304 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLK3-220ENST00000567992 GOLGA8IPA6NC78 632 aa10.65□□□□□ -0.7
CLK3-220ENST00000567992 GOLGA8JA6NMD2 632 aa10.65□□□□□ -0.7
CLK3-220ENST00000567992 PPEF2O14830 753 aa10.65□□□□□ -0.7
CLK3-220ENST00000567992 EXTL3O43909 919 aa10.65□□□□□ -0.7
CLK3-220ENST00000567992 CXCL14O95715 111 aa10.65□□□□□ -0.7
CLK3-220ENST00000567992 CYP3A5P20815 502 aa10.65□□□□□ -0.7
CLK3-220ENST00000567992 KCNA5P22460 613 aa10.65□□□□□ -0.7
CLK3-220ENST00000567992 GLUD2P49448 558 aa10.65□□□□□ -0.7
CLK3-220ENST00000567992 JADE1Q6IE81 842 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms