RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 TMEM132DQ14C87 1099 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 PLPP4Q5VZY2 271 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 PDE12Q6L8Q7 609 aaKnown RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 KIAA1841Q6NSI8 718 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 DDX53Q86TM3 631 aaKnown RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 SMYD4Q8IYR2 804 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 VPS52Q8N1B4 723 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 GUF1Q8N442 669 aaKnown RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 XXYLT1Q8NBI6 393 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 BEST2Q8NFU1 509 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 MAFAQ8NHW3 353 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 HASPINQ8TF76 798 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 C18orf25Q96B23 403 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 ZMAT2Q96NC0 199 aaKnown RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 TCF25Q9BQ70 676 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 ASB7Q9H672 318 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 CACNG4Q9UBN1 327 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 MAN1B1Q9UKM7 699 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 UBQLN1Q9UMX0 589 aaKnown RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 R3HCC1Q9Y3T6 440 aaKnown RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-219ENST00000567399 BIN1O00499 593 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 PDXKO00764 312 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 FAM189A1O60320 539 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 B3GAT3O94766 335 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 CXCL14O95715 111 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 POU3F3P20264 500 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-219ENST00000567399 DNAJB1P25685 340 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 RPL9P32969 192 aaKnown RBP16.45■□□□□ 0.22
COMMD4-219ENST00000567399 CLCNKBP51801 687 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 SURF1Q15526 300 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 JADE1Q6IE81 842 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 DCLRE1AQ6PJP8 1040 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 CRELD2Q6UXH1 353 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-219ENST00000567399 TMEM173Q86WV6 379 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-219ENST00000567399 CACTINQ8WUQ7 758 aaKnown RBP16.45■□□□□ 0.22
COMMD4-219ENST00000567399 TSG101Q99816 390 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 NUP62CLQ9H1M0 184 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 NSUN3Q9H649 340 aaKnown RBP16.45■□□□□ 0.22
COMMD4-219ENST00000567399 GOLGA2P5Q9HBQ8 144 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 NGRNQ9NPE2 291 aaKnown RBP16.45■□□□□ 0.22
COMMD4-219ENST00000567399 ADAM28Q9UKQ2 775 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 NUB1Q9Y5A7 615 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 KIAA1671Q9BY89 1806 aa16.45■□□□□ 0.22
COMMD4-219ENST00000567399 PODXLO00592 558 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 TRAPPC3O43617 180 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 RPL13P26373 211 aaKnown RBP16.44■□□□□ 0.22
COMMD4-219ENST00000567399 ERVFC1P60507 584 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 TFAMQ00059 246 aaKnown RBP16.44■□□□□ 0.22
COMMD4-219ENST00000567399 SMC1AQ14683 1233 aaKnown RBP16.44■□□□□ 0.22
COMMD4-219ENST00000567399 CEP135Q66GS9 1140 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 EP400NLQ6ZTU2 488 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 CEP57Q86XR8 500 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 ZSWIM2Q8NEG5 633 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 SPATA20Q8TB22 786 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 FNBP1Q96RU3 617 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 PAAF1Q9BRP4 392 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 KCTD10Q9H3F6 313 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 CLSTN2Q9H4D0 955 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 IGFLR1Q9H665 355 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 MARCH5Q9NX47 278 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 KIAA1468Q9P260 1216 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 TUBGCP4Q9UGJ1 667 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 SSX2IPQ9Y2D8 614 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 FRMD4BQ9Y2L6 1034 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 DERAQ9Y315 318 aa16.44■□□□□ 0.22
COMMD4-219ENST00000567399 TDRD15B5MCY1 1934 aaKnown RBP16.44■□□□□ 0.22
COMMD4-219ENST00000567399 SF3B1O75533 1304 aaKnown RBP eCLIP16.44■□□□□ 0.22
COMMD4-219ENST00000567399 COL4A4P53420 1690 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-219ENST00000567399 F8W810 466 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 MEFVO15553 781 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-219ENST00000567399 NR3C1P04150 777 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 URODP06132 367 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 NFICP08651 508 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 CYP3A5P20815 502 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 IRS1P35568 1242 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 PPP1R2P41236 205 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 PRCPP42785 496 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 SOX4Q06945 474 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-219ENST00000567399 ELAVL2Q12926 359 aaKnown RBP16.43■□□□□ 0.22
COMMD4-219ENST00000567399 NAB2Q15742 525 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 SNRNP35Q16560 246 aaKnown RBP16.43■□□□□ 0.22
COMMD4-219ENST00000567399 UPP1Q16831 310 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 FUT10Q6P4F1 479 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 RBM23Q86U06 439 aaKnown RBP16.43■□□□□ 0.22
COMMD4-219ENST00000567399 CBWD2Q8IUF1 395 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 BRSK2Q8IWQ3 736 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 C12orf56Q8IXR9 622 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 BCL7CQ8WUZ0 217 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-219ENST00000567399 TLE6Q9H808 572 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 MRPL17Q9NRX2 175 aaKnown RBP16.43■□□□□ 0.22
COMMD4-219ENST00000567399 C2CD2Q9Y426 696 aa16.43■□□□□ 0.22
COMMD4-219ENST00000567399 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-219ENST00000567399 C2CD2LO14523 706 aa16.42■□□□□ 0.22
COMMD4-219ENST00000567399 PSMA7O14818 248 aa16.42■□□□□ 0.22
COMMD4-219ENST00000567399 KIF4AO95239 1232 aa16.42■□□□□ 0.22
COMMD4-219ENST00000567399 MBD3O95983 291 aa16.42■□□□□ 0.22
COMMD4-219ENST00000567399 SOD2P04179 222 aa16.42■□□□□ 0.22
COMMD4-219ENST00000567399 ADRB2P07550 413 aa16.42■□□□□ 0.22
COMMD4-219ENST00000567399 TMEM191BP0C7N4 346 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms