RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 HIP1RO75146 1068 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 SRFP11831 508 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 NPR3P17342 541 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 OR1D2P34982 312 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 PRPHP41219 470 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 GRM5P41594 1212 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 CLCNKBP51801 687 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 ZRSR1Q15695 479 aaKnown RBP13.1□□□□□ -0.31
UBR1-206ENST00000566493 ZNF568Q3ZCX4 644 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 GRASPQ7Z6J2 395 aaPredicted RBP13.1□□□□□ -0.31
UBR1-206ENST00000566493 PPP1R10Q96QC0 940 aaKnown RBP13.1□□□□□ -0.31
UBR1-206ENST00000566493 ACO2Q99798 780 aaKnown RBP13.1□□□□□ -0.31
UBR1-206ENST00000566493 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 SLC38A7Q9NVC3 462 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 CA14Q9ULX7 337 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 TRIP11Q15643 1979 aa13.1□□□□□ -0.31
UBR1-206ENST00000566493 SMIM28A0A1B0GU29 152 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 PP2D1A8MPX8 630 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 PROB1E7EW31 1015 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 CCL16O15467 120 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 PI15O43692 258 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 FGFR3P22607 806 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 HOXA9P31269 272 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 OSTNP61366 133 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 STRN3Q13033 797 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 RAB33AQ14088 237 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 RABEP1Q15276 862 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 UPP1Q16831 310 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 RILPL1Q5EBL4 403 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 AXDND1Q5T1B0 1012 aaPredicted RBP13.09□□□□□ -0.31
UBR1-206ENST00000566493 RINT1Q6NUQ1 792 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 ANKS3Q6ZW76 656 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 CCDC105Q8IYK2 499 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 SLC7A14Q8TBB6 771 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
UBR1-206ENST00000566493 CDK5RAP3Q96JB5 506 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 ACAP3Q96P50 834 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 CDT1Q9H211 546 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 C17orf75Q9HAS0 396 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
UBR1-206ENST00000566493 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 VWA8A3KMH1 1905 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 ANHXE9PGG2 379 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 H3BQV1 296 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
UBR1-206ENST00000566493 ADAM12O43184 909 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 CENPBP07199 599 aaPredicted RBP13.08□□□□□ -0.32
UBR1-206ENST00000566493 MCF2P10911 925 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 CDC25AP30304 524 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 NBL1P41271 181 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 SMTNP53814 917 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 HTR4Q13639 388 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 IL17AQ16552 155 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 C1orf186Q6ZWK4 172 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 MTSS1LQ765P7 747 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 RTL10Q7L3V2 364 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 DTWD2Q8NBA8 298 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 RUSC1Q9BVN2 902 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.32
UBR1-206ENST00000566493 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.08□□□□□ -0.32
UBR1-206ENST00000566493 ARHGAP28Q9P2N2 729 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 MTRRQ9UBK8 725 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 CDH7Q9ULB5 785 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 BACE2Q9Y5Z0 518 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 NUMBLQ9Y6R0 609 aa13.08□□□□□ -0.32
UBR1-206ENST00000566493 KRBA1A5PL33 1030 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 SFI1A8K8P3 1242 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 I3L4J1 428 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 SLC16A4O15374 487 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 HARSP12081 509 aaKnown RBP13.07□□□□□ -0.32
UBR1-206ENST00000566493 GUCY2CP25092 1073 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 TKTP29401 623 aaKnown RBP13.07□□□□□ -0.32
UBR1-206ENST00000566493 ELF1P32519 619 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 NTHL1P78549 312 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 ANGPT1Q15389 498 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 C8orf34Q49A92 452 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 XKR4Q5GH76 650 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 MPZL3Q6UWV2 235 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 ALKAL1Q6UXT8 129 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 MAMSTRQ6ZN01 415 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 DAW1Q8N136 415 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 KCTD17Q8N5Z5 321 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 CEP120Q8N960 986 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 GPR152Q8TDT2 470 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 GOLGA2P5Q9HBQ8 144 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 ARHGEF3Q9NR81 526 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 SLC2A4RGQ9NR83 387 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 NUB1Q9Y5A7 615 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 MYH11P35749 1972 aa13.07□□□□□ -0.32
UBR1-206ENST00000566493 CITO14578 2027 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 H7C4K7 107 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 PODXLO00592 558 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 POU2F2P09086 479 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 KCNE1P15382 129 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 IGFBP6P24592 240 aaPredicted RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 RPL9P32969 192 aaKnown RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms