RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ALOX15P16050 662 aaPredicted RBP3.39□□□□□ -1.87
SMG1-212ENST00000566328 ATP5JP18859 108 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 WT1P19544 449 aaPredicted RBP3.39□□□□□ -1.87
SMG1-212ENST00000566328 ECHS1P30084 290 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 FOLR3P41439 243 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 VAV2P52735 878 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
SMG1-212ENST00000566328 BMS1Q14692 1282 aaKnown RBP3.39□□□□□ -1.87
SMG1-212ENST00000566328 UBXN2BQ14CS0 331 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 CYP2A13Q16696 494 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 UGT8Q16880 541 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 BROXQ5VW32 411 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 CNNM4Q6P4Q7 775 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 TRMT2AQ8IZ69 625 aaKnown RBP3.39□□□□□ -1.87
SMG1-212ENST00000566328 RAX2Q96IS3 184 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 ZNF778Q96MU6 729 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 MED15Q96RN5 788 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 UHRF1Q96T88 793 aaPredicted RBP3.39□□□□□ -1.87
SMG1-212ENST00000566328 ZNF70Q9UC06 446 aaPredicted RBP3.39□□□□□ -1.87
SMG1-212ENST00000566328 TEX33O43247 280 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 FKBP9O95302 570 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 LPLP06858 475 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 RAP2AP10114 183 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 CKBP12277 381 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 ADSLP30566 484 aaPredicted RBP3.38□□□□□ -1.87
SMG1-212ENST00000566328 PER3P56645 1201 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 EZH2Q15910 746 aaKnown RBP3.38□□□□□ -1.87
SMG1-212ENST00000566328 SRSF7Q16629 238 aaKnown RBP eCLIP3.38□□□□□ -1.87
SMG1-212ENST00000566328 AFMIDQ63HM1 303 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 ZNF425Q6IV72 752 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 FKBP9P1Q75LS8 142 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 REPS2Q8NFH8 660 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 GPR156Q8NFN8 814 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 HASPINQ8TF76 798 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 RIN2Q8WYP3 895 aaPredicted RBP3.38□□□□□ -1.87
SMG1-212ENST00000566328 SLC5A5Q92911 643 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 NINJ1Q92982 152 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 NACC2Q96BF6 587 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 SARAFQ96BY9 339 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 FEZ1Q99689 392 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 MS4A5Q9H3V2 200 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 CPNE5Q9HCH3 593 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 EMC7Q9NPA0 242 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 IL17RBQ9NRM6 502 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 ENTPD2Q9Y5L3 495 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 ATRNL1Q5VV63 1379 aa3.38□□□□□ -1.87
SMG1-212ENST00000566328 ARHGEF17Q96PE2 2063 aaPredicted RBP3.37□□□□□ -1.87
SMG1-212ENST00000566328 TRGV11A0A075B6L2 103 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 WDR91A4D1P6 747 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 YY2O15391 372 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 MPPED1O15442 326 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 PRKCGP05129 697 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 CELA2AP08217 269 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 ALAS1P13196 640 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 HOXB6P17509 224 aaKnown RBP3.37□□□□□ -1.87
SMG1-212ENST00000566328 ADCYAP1R1P41586 468 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 FSCN1Q16658 493 aaKnown RBP3.37□□□□□ -1.87
SMG1-212ENST00000566328 NBPF8Q3BBV2 869 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 CT83Q5H943 113 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 KAZNQ674X7 775 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 OTUD7BQ6GQQ9 843 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 HOMER1Q86YM7 354 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 ACAP3Q96P50 834 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 PNKPQ96T60 521 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 BRIP1Q9BX63 1249 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 PRDM12Q9H4Q4 367 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 USP25Q9UHP3 1055 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 AATKQ6ZMQ8 1374 aa3.37□□□□□ -1.87
SMG1-212ENST00000566328 FAM83GA6ND36 823 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 PROK1P58294 105 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 PCBP1Q15365 356 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMG1-212ENST00000566328 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMG1-212ENST00000566328 ZNF529Q6P280 563 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 PQLC1Q8N2U9 271 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 SSH3Q8TE77 659 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 NUP133Q8WUM0 1156 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 FATE1Q969F0 183 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 EAF2Q96CJ1 260 aaPredicted RBP3.36□□□□□ -1.87
SMG1-212ENST00000566328 DNAJC2Q99543 621 aaKnown RBP3.36□□□□□ -1.87
SMG1-212ENST00000566328 SENP6Q9GZR1 1112 aaPredicted RBP3.36□□□□□ -1.87
SMG1-212ENST00000566328 LANCL2Q9NS86 450 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 TMEM140Q9NV12 185 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 DPP7Q9UHL4 492 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 ZBTB21Q9ULJ3 1066 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 CD2APQ9Y5K6 639 aa3.36□□□□□ -1.87
SMG1-212ENST00000566328 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.35□□□□□ -1.87
SMG1-212ENST00000566328 BMP15O95972 392 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 MTHFD2P13995 350 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 ENPP1P22413 925 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 GUCY1A2P33402 732 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 SREBF1P36956 1147 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 GRIA3P42263 894 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 MRPS9P82933 396 aaKnown RBP3.35□□□□□ -1.87
SMG1-212ENST00000566328 CDK17Q00537 523 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 ATP13A4Q4VNC1 1196 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 KIAA0895LQ68EN5 471 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 FCRLBQ6BAA4 426 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms