RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CBWD6Q4V339 395 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 CBWD3Q5JTY5 395 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 FAM26DQ5JW98 314 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 CBWD5Q5RIA9 395 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 SLC27A1Q6PCB7 646 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 OTOP2Q7RTS6 562 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 EHBP1Q8NDI1 1231 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 ATXN2LQ8WWM7 1075 aaKnown RBP20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 ZNF830Q96NB3 372 aaPredicted RBP20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 CGRRF1Q99675 332 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 TMEM117Q9H0C3 514 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 TMX1Q9H3N1 280 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 RPF1Q9H9Y2 349 aaKnown RBP20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 SLC28A3Q9HAS3 691 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 CXXC1Q9P0U4 656 aaPredicted RBP20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 SQORQ9Y6N5 450 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 VCANP13611 3396 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 DLATP10515 647 aaKnown RBP20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 RFX1P22670 979 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 THPOP40225 353 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 GCLMP48507 274 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 ZBTB41Q5SVQ8 909 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 CACNA2D4Q7Z3S7 1137 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 ZSCAN30Q86W11 494 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 WDR49Q8IV35 697 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 THNSL1Q8IYQ7 743 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 TMEM40Q8WWA1 233 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 DNAJC7Q99615 494 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 TRPV6Q9H1D0 765 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 NKX2-4Q9H2Z4 354 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 ABHD10Q9NUJ1 306 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 TRMT13Q9NUP7 481 aaKnown RBP20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 THEGQ9P2T0 379 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 MYO6Q9UM54 1294 aa20.64■□□□□ 0.89
CSPG4P13-201ENST00000565545 NOL4O94818 638 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 CHRNA1P02708 482 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 SKILP12757 684 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 TNNI1P19237 187 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 SLC9A1P19634 815 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 FGFR4P22455 802 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 FECHP22830 423 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 GRM5P41594 1212 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 CCZ1BP86790 482 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 CCZ1P86791 482 aaPredicted RBP20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 LRMPQ12912 555 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 TRIM71Q2Q1W2 868 aaKnown RBP20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 EPC2Q52LR7 807 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 KLHDC7AQ5VTJ3 777 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 DPY19L2P1Q6NXN4 242 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 TRIM65Q6PJ69 517 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 C15orf39Q6ZRI6 1047 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 CD302Q8IX05 232 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 WNT8BQ93098 351 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 BAG1Q99933 345 aaPredicted RBP20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 GANQ9H2C0 597 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 PDE11AQ9HCR9 933 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 CHST12Q9NRB3 414 aa20.63■□□□□ 0.89
CSPG4P13-201ENST00000565545 ANK1P16157 1881 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 UMODL1Q5DID0 1318 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 GPR182O15218 404 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 B4GALT4O60513 344 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 RPS6KA5O75582 802 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 STAG3L1P0CL83 205 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 TNFSF9P41273 254 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 ADGRE1Q14246 886 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 SV2AQ7L0J3 742 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 CDR2LQ86X02 465 aaPredicted RBP20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 RPUSD2Q8IZ73 545 aaKnown RBP20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 FBXL13Q8NEE6 735 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 LMO3Q8TAP4 145 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 SYN2Q92777 582 aaPredicted RBP20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 ASB2Q96Q27 587 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 POP1Q99575 1024 aaKnown RBP20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 CCDC94Q9BW85 323 aaPredicted RBP20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 INTS2Q9H0H0 1204 aaKnown RBP20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 ASB7Q9H672 318 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 SIX2Q9NPC8 291 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 ZNHIT6Q9NWK9 470 aaKnown RBP20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 NOC2LQ9Y3T9 749 aaKnown RBP20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 CDH23Q9H251 3354 aa20.62■□□□□ 0.89
CSPG4P13-201ENST00000565545 RNF225M0QZC1 329 aaPredicted RBP20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 ZC3H11AO75152 810 aaKnown RBP eCLIP20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 C4BPAP04003 597 aaKnown RBP20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 UCHL3P15374 230 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 HNRNPH3P31942 346 aaKnown RBP20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 KCNJ6P48051 423 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 POLR2FP61218 127 aaKnown RBP20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 MRPS5P82675 430 aaKnown RBP20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 GOLGA8FQ08AF8 430 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 GOLGA8DPQ0D2H9 430 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 ENOX2Q16206 610 aaKnown RBP20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 ZACNQ401N2 412 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 SEZ6Q53EL9 994 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 FAM43BQ6ZT52 329 aaPredicted RBP20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 FAM228AQ86W67 206 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 NT5DC4Q86YG4 428 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 TMTC1Q8IUR5 882 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 FMNL3Q8IVF7 1028 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 CAGE1Q8TC20 777 aa20.61■□□□□ 0.89
CSPG4P13-201ENST00000565545 DHX38Q92620 1227 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms