RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 DAB1O75553 588 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ZMYND10O75800 440 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ARHGEF15O94989 841 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ADSLP30566 484 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 GRIK1P39086 918 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 MTHFSP49914 203 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 RAP1GDS1P52306 607 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 SLC18A1P54219 525 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ERVK-24P63145 666 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 MRPS15P82914 257 aaKnown RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ACAP1Q15027 740 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 MTFR1Q15390 333 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 MOGQ16653 247 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 EDRF1Q3B7T1 1238 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 LEXMQ3ZCV2 418 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ANKRD20A4Q4UJ75 823 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 SLC45A4Q5BKX6 768 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 FAM91A1Q658Y4 838 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 IQSEC1Q6DN90 963 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ZNF746Q6NUN9 644 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 METTL2BQ6P1Q9 378 aaKnown RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 KLHDC10Q6PID8 442 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 CORO6Q6QEF8 472 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 DSTYKQ6XUX3 929 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 PRR23BQ6ZRT6 265 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 CAPN12Q6ZSI9 719 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 VASH1Q7L8A9 365 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 GALNT7Q86SF2 657 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 RELL1Q8IUW5 271 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 CCDC28AQ8IWP9 274 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 SIX5Q8N196 739 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 LILRB2Q8N423 598 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 MARVELD2Q8N4S9 558 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 PDPRQ8NCN5 879 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ENKURQ8TC29 256 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 UTP4Q969X6 686 aaKnown RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 CCDC127Q96BQ5 260 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 NMD3Q96D46 503 aaKnown RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 REXO5Q96IC2 774 aaKnown RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 EGLN2Q96KS0 407 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 CAPZA3Q96KX2 299 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ZNF641Q96N77 438 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 NUP88Q99567 741 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 METTL22Q9BUU2 404 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 TBC1D10AQ9BXI6 508 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 GON7Q9BXV9 100 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 TRIM15Q9C019 465 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 B3GNT4Q9C0J1 378 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 MUC3BQ9H195 1237 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 VPS33BQ9H267 617 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 EHD1Q9H4M9 534 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 PSTPIP2Q9H939 334 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 UBN1Q9NPG3 1134 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 C12orf4Q9NQ89 552 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 TLR7Q9NYK1 1049 aaKnown RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 RRN3Q9NYV6 651 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 HMGXB4Q9UGU5 601 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 NUP50Q9UKX7 468 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 CAPN11Q9UMQ6 739 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 WBP11Q9Y2W2 641 aaKnown RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 WDR19Q8NEZ3 1342 aa6.65□□□□□ -1.35
PTPN9-204ENST00000564970 COL3A1P02461 1466 aaPredicted RBP6.65□□□□□ -1.35
PTPN9-204ENST00000564970 TMEM131LA2VDJ0 1609 aa6.65□□□□□ -1.35
PTPN9-204ENST00000564970 GTPBP10A4D1E9 387 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 A6NJR5 290 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 OR5K4A6NMS3 321 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 POTECB2RU33 542 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 DDX3XO00571 662 aaKnown RBP eCLIP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 FOXP2O15409 715 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 MAGEB2O15479 319 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 RNF113AO15541 343 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 AQP9O43315 295 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 KCNQ3O43525 872 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 DENRO43583 198 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 CIB2O75838 187 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 PAHP00439 452 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 NTRK1P04629 796 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 MYBL1P10243 752 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 COL6A2P12110 1019 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 KRT5P13647 590 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 ANXA13P27216 316 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 MARCKSP29966 332 aaPredicted RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 HNRNPH3P31942 346 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 CHKAP35790 457 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 CARSP49589 748 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 VPS41P49754 854 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 ETV1P50549 477 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 IST1P53990 364 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 DRG2P55039 364 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 SSTP61278 116 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 GOLGA8FQ08AF8 430 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 GOLGA8DPQ0D2H9 430 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 STRN3Q13033 797 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 STX3Q13277 289 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 STILQ15468 1287 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 TWISTNBQ3B726 338 aaPredicted RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 C5orf22Q49AR2 442 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 TNFAIP8L3Q5GJ75 292 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 NEK5Q6P3R8 708 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 FAM173BQ6P4H8 233 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms