RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 LPIN1Q14693 890 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 PTPN21Q16825 1174 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 SEZ6Q53EL9 994 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 SLC27A1Q6PCB7 646 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 TRAF7Q6Q0C0 670 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 CRELD2Q6UXH1 353 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-205ENST00000564899 LRRC8DQ7L1W4 858 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 USP37Q86T82 979 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 VSTM4Q8IW00 320 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 BRSK2Q8IWQ3 736 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 DRC7Q8IY82 874 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 THNSL1Q8IYQ7 743 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 CEP120Q8N960 986 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 CCDC127Q96BQ5 260 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 MFSD14AQ96MC6 490 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 TSPYL2Q9H2G4 693 aaPredicted RBP12.03□□□□□ -0.48
SF3B3-205ENST00000564899 MTIF3Q9H2K0 278 aaKnown RBP12.03□□□□□ -0.48
SF3B3-205ENST00000564899 ST3GAL5Q9UNP4 418 aa12.03□□□□□ -0.48
SF3B3-205ENST00000564899 TANC1Q9C0D5 1861 aa12.02□□□□□ -0.48
SF3B3-205ENST00000564899 CD52P31358 61 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 TNFSF9P41273 254 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 OSTNP61366 133 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 ENPEPQ07075 957 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 PSMD6Q15008 389 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 KYAT1Q16773 422 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 TCTN1Q2MV58 587 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 TMC6Q7Z403 805 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 SPC24Q8NBT2 197 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 PLEKHO2Q8TD55 490 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 GDPD5Q8WTR4 605 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 PDLIM2Q96JY6 352 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 EIF2AQ9BY44 585 aaKnown RBP12.02□□□□□ -0.49
SF3B3-205ENST00000564899 TRIM6Q9C030 488 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-205ENST00000564899 MMRN2Q9H8L6 949 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 AGO3Q9H9G7 860 aaKnown RBP12.02□□□□□ -0.49
SF3B3-205ENST00000564899 ERVK-5Q9HDB9 667 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 CPSF3Q9UKF6 684 aaKnown RBP12.02□□□□□ -0.49
SF3B3-205ENST00000564899 PADI3Q9ULW8 664 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 SQORQ9Y6N5 450 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 CFAP54Q96N23 3096 aa12.02□□□□□ -0.49
SF3B3-205ENST00000564899 A0A1W2PQC6 194 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 LRRIQ3A6PVS8 624 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-205ENST00000564899 PITPNM1O00562 1244 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 STX10O60499 249 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 GPR37L1O60883 481 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 N4BP1O75113 896 aaKnown RBP12.01□□□□□ -0.49
SF3B3-205ENST00000564899 CLTAP09496 248 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 STAG3L1P0CL83 205 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 DLATP10515 647 aaKnown RBP12.01□□□□□ -0.49
SF3B3-205ENST00000564899 DEKP35659 375 aaKnown RBP12.01□□□□□ -0.49
SF3B3-205ENST00000564899 PBX1P40424 430 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 GRM5P41594 1212 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 DLG4P78352 724 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 MYL7Q01449 175 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 MBTPS1Q14703 1052 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 SYCP1Q15431 976 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 SURF1Q15526 300 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 AAK1Q2M2I8 961 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 SPECC1LQ69YQ0 1117 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
SF3B3-205ENST00000564899 PARD3BQ8TEW8 1205 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 PCMTD1Q96MG8 357 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-205ENST00000564899 FNBP1Q96RU3 617 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 PPP1R9BQ96SB3 815 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 CCDC94Q9BW85 323 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-205ENST00000564899 OSBPL7Q9BZF2 842 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 RPF1Q9H9Y2 349 aaKnown RBP12.01□□□□□ -0.49
SF3B3-205ENST00000564899 CHST12Q9NRB3 414 aa12.01□□□□□ -0.49
SF3B3-205ENST00000564899 ARIH1Q9Y4X5 557 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-205ENST00000564899 GOLGA6L6A8MZA4 724 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 CXCL8P10145 99 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 ZSCAN20P17040 1043 aaPredicted RBP12□□□□□ -0.49
SF3B3-205ENST00000564899 GCLMP48507 274 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 FMO5P49326 533 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 MXI1P50539 228 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 WNT7BP56706 349 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 MCCD1P59942 119 aaPredicted RBP12□□□□□ -0.49
SF3B3-205ENST00000564899 POU5F1Q01860 360 aaKnown RBP12□□□□□ -0.49
SF3B3-205ENST00000564899 GPNMBQ14956 572 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 ENOX2Q16206 610 aaKnown RBP12□□□□□ -0.49
SF3B3-205ENST00000564899 C1orf220Q5T0J3 134 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 UBXN11Q5T124 520 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 HERC6Q8IVU3 1022 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 TMEM192Q8IY95 271 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 HLA-CQ95604 372 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 FAM212AQ96EL1 285 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 ACAP3Q96P50 834 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 ERGIC2Q96RQ1 377 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 POP1Q99575 1024 aaKnown RBP12□□□□□ -0.49
SF3B3-205ENST00000564899 CGRRF1Q99675 332 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 PDE11AQ9HCR9 933 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 TOPORSQ9NS56 1045 aaPredicted RBP12□□□□□ -0.49
SF3B3-205ENST00000564899 SNTG2Q9NY99 539 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 ITIH6Q6UXX5 1313 aa12□□□□□ -0.49
SF3B3-205ENST00000564899 GTPBP10A4D1E9 387 aaKnown RBP11.99□□□□□ -0.49
SF3B3-205ENST00000564899 PI4K2BG5E9Z4 385 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 IL18RAPO95256 599 aa11.99□□□□□ -0.49
SF3B3-205ENST00000564899 PTMAP06454 111 aaKnown RBP11.99□□□□□ -0.49
SF3B3-205ENST00000564899 TNNI1P19237 187 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms