RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 APBB1IPQ7Z5R6 666 aaPredicted RBP21.07■□□□□ 0.96
CLN6-205ENST00000564846 CEP120Q8N960 986 aa21.07■□□□□ 0.96
CLN6-205ENST00000564846 TRIM58Q8NG06 486 aa21.07■□□□□ 0.96
CLN6-205ENST00000564846 PPP1R13LQ8WUF5 828 aa21.07■□□□□ 0.96
CLN6-205ENST00000564846 DNAJB3Q8WWF6 145 aa21.07■□□□□ 0.96
CLN6-205ENST00000564846 BTNL10A8MVZ5 291 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 TACC1O75410 805 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 PGK1P00558 417 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 GNRH1P01148 92 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 STAG3L1P0CL83 205 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 DARSP14868 501 aaKnown RBP21.06■□□□□ 0.96
CLN6-205ENST00000564846 TNFAIP3P21580 790 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 OSTNP61366 133 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 TRAPPC11Q7Z392 1133 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 LNX1Q8TBB1 728 aaPredicted RBP21.06■□□□□ 0.96
CLN6-205ENST00000564846 AGPAT1Q99943 283 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 IMPG2Q9BZV3 1241 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 XPNPEP3Q9NQH7 507 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 INTUQ9ULD6 942 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 GINS2Q9Y248 185 aa21.06■□□□□ 0.96
CLN6-205ENST00000564846 ADAMTS4O75173 837 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 SLU7O95391 586 aaKnown RBP21.05■□□□□ 0.96
CLN6-205ENST00000564846 PRKAR2AP13861 404 aaKnown RBP21.05■□□□□ 0.96
CLN6-205ENST00000564846 TBXAS1P24557 533 aaPredicted RBP21.05■□□□□ 0.96
CLN6-205ENST00000564846 TAF2Q6P1X5 1199 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 GLYCTKQ8IVS8 523 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 OLIG1Q8TAK6 271 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 CD99L2Q8TCZ2 262 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 NOX5Q96PH1 765 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 MTMR12Q9C0I1 747 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 TNNC2P02585 160 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 TMEM191BP0C7N4 346 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 CXCL8P10145 99 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 ELNP15502 786 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 ZNF200P98182 395 aaPredicted RBP21.05■□□□□ 0.96
CLN6-205ENST00000564846 DCAF4L1Q3SXM0 396 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 CXCL17Q6UXB2 119 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 CATSPER4Q7RTX7 472 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 ZNF784Q8NCA9 323 aaPredicted RBP21.05■□□□□ 0.96
CLN6-205ENST00000564846 U2AF1L4Q8WU68 220 aaKnown RBP21.05■□□□□ 0.96
CLN6-205ENST00000564846 ANKRD36BP1Q96IX9 119 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 ALS2CR12Q96Q35 445 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 OSMRQ99650 979 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 ASB7Q9H672 318 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 MRFAP1Q9Y605 127 aa21.05■□□□□ 0.96
CLN6-205ENST00000564846 CYP26A1O43174 497 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 CTIFO43310 598 aaKnown RBP21.04■□□□□ 0.96
CLN6-205ENST00000564846 HMGCRP04035 888 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 EIF4BP23588 611 aaKnown RBP21.04■□□□□ 0.96
CLN6-205ENST00000564846 CCND3P30281 292 aaPredicted RBP21.04■□□□□ 0.96
CLN6-205ENST00000564846 AXLP30530 894 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 VEGFBP49765 207 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 TFAMQ00059 246 aaKnown RBP21.04■□□□□ 0.96
CLN6-205ENST00000564846 CUL2Q13617 745 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 TMEM192Q8IY95 271 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 EPS8L1Q8TE68 723 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 PACSIN1Q9BY11 444 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 CDHR5Q9HBB8 845 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 GTF2IRD1Q9UHL9 959 aa21.04■□□□□ 0.96
CLN6-205ENST00000564846 ANO9A1A5B4 782 aa21.03■□□□□ 0.96
CLN6-205ENST00000564846 SGPL1O95470 568 aa21.03■□□□□ 0.96
CLN6-205ENST00000564846 ASS1P00966 412 aaKnown RBP21.03■□□□□ 0.96
CLN6-205ENST00000564846 H2AFZP0C0S5 128 aa21.03■□□□□ 0.96
CLN6-205ENST00000564846 NOP14P78316 857 aaKnown RBP21.03■□□□□ 0.96
CLN6-205ENST00000564846 H2AFVQ71UI9 128 aa21.03■□□□□ 0.96
CLN6-205ENST00000564846 EFCAB13Q8IY85 973 aa21.03■□□□□ 0.96
CLN6-205ENST00000564846 APOBEC3GQ9HC16 384 aaKnown RBP21.03■□□□□ 0.96
CLN6-205ENST00000564846 MOCS3O95396 460 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 CST3P01034 146 aaPredicted RBP21.02■□□□□ 0.96
CLN6-205ENST00000564846 FGFR4P22455 802 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 CST5P28325 142 aaPredicted RBP21.02■□□□□ 0.96
CLN6-205ENST00000564846 HOXA11P31270 313 aaPredicted RBP21.02■□□□□ 0.96
CLN6-205ENST00000564846 GRM5P41594 1212 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 PDE6CP51160 858 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 CRYBB1P53674 252 aaPredicted RBP21.02■□□□□ 0.96
CLN6-205ENST00000564846 TRPC3Q13507 836 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 SGSM1Q2NKQ1 1148 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 NBPF20Q3BBV1 942 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 MAP3K21Q5TCX8 1036 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 SMYD5Q6GMV2 418 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 NOTUMQ6P988 496 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 SLC27A1Q6PCB7 646 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 KLHDC9Q8NEP7 349 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 PXYLP1Q8TE99 480 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 DHX38Q92620 1227 aaKnown RBP21.02■□□□□ 0.96
CLN6-205ENST00000564846 SALL4Q9UJQ4 1053 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 NOCTQ9UK39 431 aaKnown RBP21.02■□□□□ 0.96
CLN6-205ENST00000564846 CAPN6Q9Y6Q1 641 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 LACTBL1A8MY62 500 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 KRT5P13647 590 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 CYP11B1P15538 503 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 SNX17Q15036 470 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 SPOPLQ6IQ16 392 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 SLC47A2Q86VL8 602 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 CD302Q8IX05 232 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 RAET1EQ8TD07 263 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 SLC20A1Q8WUM9 679 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 ELMO3Q96BJ8 720 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 ERO1AQ96HE7 468 aa21.02■□□□□ 0.96
CLN6-205ENST00000564846 ACAP3Q96P50 834 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms