RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 NLRP12P59046 1061 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 FKBP3Q00688 224 aaKnown RBP17.76■□□□□ 0.43
USB1-204ENST00000561568 PLCB3Q01970 1234 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 GPM6BQ13491 265 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 NAB2Q15742 525 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 ZCWPW2Q504Y3 356 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 CT47A1Q5JQC4 288 aaPredicted RBP17.76■□□□□ 0.43
USB1-204ENST00000561568 GLRA4Q5JXX5 417 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 ANKRD40Q6AI12 368 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 SASS6Q6UVJ0 657 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 CBWD2Q8IUF1 395 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 BRSK2Q8IWQ3 736 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 KLHL23Q8NBE8 558 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 ZSWIM2Q8NEG5 633 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 CACTINQ8WUQ7 758 aaKnown RBP17.76■□□□□ 0.43
USB1-204ENST00000561568 KIF12Q96FN5 646 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 HCSTQ9UBK5 93 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 DACH1Q9UI36 760 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 UBQLN1Q9UMX0 589 aaKnown RBP17.76■□□□□ 0.43
USB1-204ENST00000561568 C2CD2Q9Y426 696 aa17.76■□□□□ 0.43
USB1-204ENST00000561568 GBF1Q92538 1859 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 CETN3O15182 167 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 MAPK13O15264 365 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 FGF18O76093 207 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 SLC11A1P49279 550 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 UBE3AQ05086 875 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 DCLRE1AQ6PJP8 1040 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 SLC39A11Q8N1S5 342 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 DEFB123Q8N688 67 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 BEST2Q8NFU1 509 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 MFSD14AQ96MC6 490 aa17.75■□□□□ 0.43
USB1-204ENST00000561568 NT5C1B-RDH14C9J2C7 533 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 TULP1O00294 542 aaPredicted RBP17.74■□□□□ 0.43
USB1-204ENST00000561568 PSMC2P35998 433 aaKnown RBP17.74■□□□□ 0.43
USB1-204ENST00000561568 SPAG1Q07617 926 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 TMEM132DQ14C87 1099 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 SPATA1Q5VX52 437 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 CEP135Q66GS9 1140 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 JADE1Q6IE81 842 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 KLHL10Q6JEL2 608 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 CAVIN1Q6NZI2 390 aaKnown RBP17.74■□□□□ 0.43
USB1-204ENST00000561568 SPRED2Q7Z698 418 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 USP37Q86T82 979 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 NELFBQ8WX92 580 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 TMEM169Q96HH4 297 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 IGSF21Q96ID5 467 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 FNBP1Q96RU3 617 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 LMCD1Q9NZU5 365 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 TMEM63CQ9P1W3 806 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 LZTS1Q9Y250 596 aa17.74■□□□□ 0.43
USB1-204ENST00000561568 B4GALT3O60512 393 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 TADA2AO75478 443 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 FGFR1OPO95684 399 aaKnown RBP17.73■□□□□ 0.43
USB1-204ENST00000561568 ITGB1P05556 798 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 CYP24A1Q07973 514 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 PAK1Q13153 545 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 BMS1Q14692 1282 aaKnown RBP17.73■□□□□ 0.43
USB1-204ENST00000561568 PSMD6Q15008 389 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 PTPROQ16827 1216 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 UPP1Q16831 310 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 SPPL3Q8TCT6 385 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 C18orf25Q96B23 403 aaPredicted RBP17.73■□□□□ 0.43
USB1-204ENST00000561568 FAM161BQ96MY7 647 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 MKNK1Q9BUB5 465 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 LMAN2LQ9H0V9 348 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 PRDM12Q9H4Q4 367 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 RWDD2AQ9UIY3 292 aa17.73■□□□□ 0.43
USB1-204ENST00000561568 CASTOR2A6NHX0 329 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 PAX3P23760 479 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 ERCC5P28715 1186 aaPredicted RBP17.72■□□□□ 0.43
USB1-204ENST00000561568 LRPAP1P30533 357 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 PBX3P40426 434 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 CASP4P49662 377 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 CLCNKBP51801 687 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 PMS1P54277 932 aaKnown RBP17.72■□□□□ 0.43
USB1-204ENST00000561568 ENPEPQ07075 957 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 DUOXA2Q1HG44 320 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 PDE12Q6L8Q7 609 aaKnown RBP17.72■□□□□ 0.43
USB1-204ENST00000561568 INTS8Q75QN2 995 aaKnown RBP17.72■□□□□ 0.43
USB1-204ENST00000561568 FILIP1Q7Z7B0 1213 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 DDX53Q86TM3 631 aaKnown RBP17.72■□□□□ 0.43
USB1-204ENST00000561568 TMC2Q8TDI7 906 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 CCDC127Q96BQ5 260 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 CEP63Q96MT8 703 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 GAS2L1Q99501 681 aaPredicted RBP17.72■□□□□ 0.43
USB1-204ENST00000561568 ALG13Q9NP73 1137 aaKnown RBP17.72■□□□□ 0.43
USB1-204ENST00000561568 DPP3Q9NY33 737 aa17.72■□□□□ 0.43
USB1-204ENST00000561568 PRG3Q9Y2Y8 225 aaPredicted RBP17.72■□□□□ 0.43
USB1-204ENST00000561568 CITO14578 2027 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 TMEM189-UBE2V1I3L0A0 370 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 RFXAPO00287 272 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 IKBKBO14920 756 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 TRAPPC3O43617 180 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 AKAP3O75969 853 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 B3GAT3O94766 335 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 NFICP08651 508 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 KRT13P13646 458 aa17.71■□□□□ 0.43
USB1-204ENST00000561568 TNNI1P19237 187 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms