RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 C7orf25Q9BPX7 421 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 SOX7Q9BT81 388 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 HAPLN2Q9GZV7 340 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 CTDP1Q9Y5B0 961 aaPredicted RBP4.72□□□□□ -1.65
HERC1-215ENST00000561436 PIK3R4Q99570 1358 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 ERVK-7P63135 1459 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 CAMSAP2Q08AD1 1489 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 CDK12Q9NYV4 1490 aaPredicted RBP4.72□□□□□ -1.65
HERC1-215ENST00000561436 NEURL4Q96JN8 1562 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 CCDC194A0A1B0GVG4 234 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 AP1G1O43747 822 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 ENDOD1O94919 500 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 LTA4HP09960 611 aaKnown RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 ACO1P21399 889 aaKnown RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 LPOP22079 712 aaPredicted RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 ECHS1P30084 290 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 GNALP38405 381 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 WASP42768 502 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 MCAMP43121 646 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 BPIFB4P59827 614 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 FOXL1Q12952 345 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 HDAC1Q13547 482 aaPredicted RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 RIN1Q13671 783 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 IDI1Q13907 227 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 NFYCQ13952 458 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 R3HDM1Q15032 1099 aaKnown RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 Q6ZSN1 163 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 EPM2AIP1Q7L775 607 aaPredicted RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 GRAMD1CQ8IYS0 662 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 DVL3Q92997 716 aaPredicted RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 NKD2Q969F2 451 aaPredicted RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 TTC17Q96AE7 1141 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 COA7Q96BR5 231 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 MANSC1Q9H8J5 431 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 FAM204AQ9H8W3 233 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 C14orf93Q9H972 538 aaKnown RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.71□□□□□ -1.66
HERC1-215ENST00000561436 NCDNQ9UBB6 729 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 GABBR1Q9UBS5 961 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 TUBD1Q9UJT1 453 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 JAG2Q9Y219 1238 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 CFAP20Q9Y6A4 193 aaKnown RBP4.71□□□□□ -1.66
HERC1-215ENST00000561436 MYOM3Q5VTT5 1437 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 ERBINQ96RT1 1412 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 RPTORQ8N122 1335 aa4.71□□□□□ -1.66
HERC1-215ENST00000561436 SYNMO15061 1565 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 NKTRP30414 1462 aaKnown RBP4.7□□□□□ -1.66
HERC1-215ENST00000561436 SLC26A4O43511 780 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 AKR1B10O60218 316 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 CTNND1O60716 968 aaKnown RBP4.7□□□□□ -1.66
HERC1-215ENST00000561436 RAD17O75943 681 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 LY86O95711 162 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 POU2F2P09086 479 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 GSPT1P15170 499 aaKnown RBP4.7□□□□□ -1.66
HERC1-215ENST00000561436 IL12RB1P42701 662 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 SELENOPP49908 381 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 PER3P56645 1201 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 WNT3AP56704 352 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 ADAM8P78325 824 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 NOMO1Q15155 1222 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 ZXDCQ2QGD7 858 aaPredicted RBP4.7□□□□□ -1.66
HERC1-215ENST00000561436 USP45Q70EL2 814 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 CAMKK1Q8N5S9 505 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 TTC9BQ8N6N2 239 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 GPR156Q8NFN8 814 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 PPP1R14CQ8TAE6 165 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 NRG4Q8WWG1 115 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 MVB12AQ96EY5 273 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 FAM193BQ96PV7 902 aaPredicted RBP4.7□□□□□ -1.66
HERC1-215ENST00000561436 UHRF1Q96T88 793 aaPredicted RBP4.7□□□□□ -1.66
HERC1-215ENST00000561436 FDXACB1Q9BRP7 624 aaPredicted RBP4.7□□□□□ -1.66
HERC1-215ENST00000561436 KMT5AQ9NQR1 393 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 OBP2AQ9NY56 170 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 CNOT11Q9UKZ1 510 aaKnown RBP4.7□□□□□ -1.66
HERC1-215ENST00000561436 INTUQ9ULD6 942 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 TCAF1Q9Y4C2 921 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 ALKQ9UM73 1620 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 EHBP1L1Q8N3D4 1523 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 ITSN2Q9NZM3 1697 aa4.7□□□□□ -1.66
HERC1-215ENST00000561436 PLEKHG1Q9ULL1 1385 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 PRDM15P57071 1507 aaPredicted RBP4.69□□□□□ -1.66
HERC1-215ENST00000561436 CCDC154A6NI56 674 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 NRP1O14786 923 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 MUSKO15146 869 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 MATN3O15232 486 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 PRPF3O43395 683 aaKnown RBP4.69□□□□□ -1.66
HERC1-215ENST00000561436 STC2O76061 302 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 TOX4O94842 621 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 PDCP20941 246 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 COMTP21964 271 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 ADCY7P51828 1080 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 DGCR2P98153 550 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 MGAT2Q10469 447 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 PGS1Q32NB8 556 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 CCDC157Q569K6 752 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 MEX3CQ5U5Q3 659 aaKnown RBP4.69□□□□□ -1.66
HERC1-215ENST00000561436 KRT40Q6A162 431 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 CATIPQ7Z7H3 387 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 CLEC14AQ86T13 490 aa4.69□□□□□ -1.66
HERC1-215ENST00000561436 DENND1CQ8IV53 801 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms