RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 DPY19L2P1Q6NXN4 242 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 EFCAB12Q6NXP0 572 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 PDXDC1Q6P996 788 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 CXCL17Q6UXB2 119 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 RAD9BQ6WBX8 426 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 TOGARAM2Q6ZUX3 1019 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 HFE2Q6ZVN8 426 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 DEFB128Q7Z7B8 93 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 CBWD2Q8IUF1 395 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 ZBTB8OSQ8IWT0 167 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 PLEKHO2Q8TD55 490 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 ZBTB10Q96DT7 871 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 SAAL1Q96ER3 474 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 PPP1R13BQ96KQ4 1090 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 C2orf40Q9H1Z8 148 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 OCEL1Q9H607 264 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 ZNHIT6Q9NWK9 470 aaKnown RBP8.16□□□□□ -1.1
TPM1-231ENST00000561395 MYO7AQ13402 2215 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 GRIN2DO15399 1336 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.15□□□□□ -1.1
TPM1-231ENST00000561395 GOLGA8IPA6NC78 632 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 RRN3P2A6NIE6 340 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 LRRC53A6NM62 1247 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 GOLGA8JA6NMD2 632 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 KIAA0391O15091 583 aaKnown RBP8.15□□□□□ -1.1
TPM1-231ENST00000561395 PMM2O15305 246 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 P4HA2O15460 535 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 ZSCAN12O43309 604 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 EXTL3O43909 919 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 N4BP1O75113 896 aaKnown RBP8.15□□□□□ -1.1
TPM1-231ENST00000561395 CABYRO75952 493 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 PRKCBP05771 671 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 SRGAP2CP0DJJ0 459 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 ACTN1P12814 892 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 SLC9A1P19634 815 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 KLRC1P26715 233 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 PON1P27169 355 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 CPT1AP50416 773 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 NKX3-2P78367 333 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 CDK17Q00537 523 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 APBA1Q02410 837 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 POU5F1BQ06416 359 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 CYP24A1Q07973 514 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 C1orf220Q5T0J3 134 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 MARCH8Q5T0T0 291 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 IER5LQ5T953 404 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 KLHDC7AQ5VTJ3 777 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 SLFN12LQ6IEE8 588 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 MTHFD1LQ6UB35 978 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 ZPBP2Q6X784 338 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.15□□□□□ -1.1
TPM1-231ENST00000561395 RRAGAQ7L523 313 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 CACNA2D4Q7Z3S7 1137 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 RHPN2Q8IUC4 686 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 HERC6Q8IVU3 1022 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 GPD1LQ8N335 351 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 METTL13Q8N6R0 699 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 RNF149Q8NC42 400 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 PRSS33Q8NF86 280 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 PHOSPHO2Q8TCD6 241 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 SYN2Q92777 582 aaPredicted RBP8.15□□□□□ -1.1
TPM1-231ENST00000561395 KAT2BQ92831 832 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 MFSD14AQ96MC6 490 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 NLRP4Q96MN2 994 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 CHP1Q99653 195 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 TARS2Q9BW92 718 aaKnown RBP8.15□□□□□ -1.1
TPM1-231ENST00000561395 MRPL4Q9BYD3 311 aaKnown RBP8.15□□□□□ -1.1
TPM1-231ENST00000561395 NFKBIZQ9BYH8 718 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 HAPLN2Q9GZV7 340 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 AP5M1Q9H0R1 490 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 NUCKS1Q9H1E3 243 aaKnown RBP8.15□□□□□ -1.1
TPM1-231ENST00000561395 SLC24A3Q9HC58 644 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 KIAA1586Q9HCI6 787 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 SIX2Q9NPC8 291 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 TRMT1Q9NXH9 659 aaKnown RBP8.15□□□□□ -1.1
TPM1-231ENST00000561395 LMCD1Q9NZU5 365 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 FBXL5Q9UKA1 691 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 PLAGL2Q9UPG8 496 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 PPP2R2CQ9Y2T4 447 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 CACNA1HO95180 2353 aa8.15□□□□□ -1.1
TPM1-231ENST00000561395 ZFHX2Q9C0A1 2572 aaPredicted RBP8.15□□□□□ -1.11
TPM1-231ENST00000561395 DCHS1Q96JQ0 3298 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 CACNA1BQ00975 2339 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 A0A0B4J269 797 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 GRXCR2A6NFK2 248 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 LRRIQ3A6PVS8 624 aaPredicted RBP8.14□□□□□ -1.11
TPM1-231ENST00000561395 HAS3O00219 553 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 OFD1O75665 1012 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 SMIM10L2AP0DMW4 78 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 SMIM10L2BP0DMW5 78 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 UCHL3P15374 230 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 TMOD1P28289 359 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 GTF2H1P32780 548 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 PHKA2P46019 1235 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 PSEN2P49810 448 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 PTPN5P54829 565 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 PTENP60484 403 aa8.14□□□□□ -1.11
TPM1-231ENST00000561395 POLR2FP61218 127 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms