RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ZFAND2BQ8WV99 257 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 MAML1Q92585 1016 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 EZH1Q92800 747 aaPredicted RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 CADM1Q9BY67 442 aaKnown RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 EMSYQ7Z589 1322 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 MYH14Q7Z406 1995 aaKnown RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 EML1O00423 815 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 CHMP2AO43633 222 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 GAS8O95995 478 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 UBTFL6P0CB48 400 aaPredicted RBP17.54■□□□□ 0.4
TPM1-228ENST00000560975 SNHG28P0DPA3 235 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 SKIP12755 728 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 GCLMP48507 274 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 DAB2IPQ5VWQ8 1189 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 NAP1L4Q99733 375 aaKnown RBP17.54■□□□□ 0.4
TPM1-228ENST00000560975 AGPAT3Q9NRZ7 376 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 SIGLEC16A6NMB1 481 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 FSCN2O14926 492 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 CYP26A1O43174 497 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 TCEA3O75764 348 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 RANBP1P43487 201 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 SERPINB4P48594 390 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 PTK6Q13882 451 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 STAT4Q14765 748 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 HHATQ5VTY9 493 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 OTOAQ7RTW8 1153 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 TRABD2AQ86V40 505 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 TPH2Q8IWU9 490 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 LMO3Q8TAP4 145 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 PSPC1Q8WXF1 523 aaKnown RBP17.54■□□□□ 0.4
TPM1-228ENST00000560975 ELMO3Q96BJ8 720 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 MAST2Q6P0Q8 1798 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 CFAP69A5D8W1 941 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 FAM86B1E9PN63 330 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 LMNAP02545 664 aaKnown RBP17.54■□□□□ 0.4
TPM1-228ENST00000560975 FAM86B2P0C5J1 330 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 FGFR1P11362 822 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 BFSP1Q12934 665 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 CUL3Q13618 768 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 QRICH1Q2TAL8 776 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 CERKLQ49MI3 558 aaPredicted RBP17.54■□□□□ 0.4
TPM1-228ENST00000560975 ACSBG2Q5FVE4 666 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 IZUMO3Q5VZ72 239 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 SLC47A2Q86VL8 602 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 SYCP3Q8IZU3 236 aa17.54■□□□□ 0.4
TPM1-228ENST00000560975 EIF2AK1Q9BQI3 630 aaKnown RBP17.54■□□□□ 0.4
TPM1-228ENST00000560975 TISP43B9A030 160 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 APLFQ8IW19 511 aaPredicted RBP17.53■□□□□ 0.4
TPM1-228ENST00000560975 RBM15Q96T37 977 aaKnown RBP eCLIP17.53■□□□□ 0.42e-7■■□□□ 13.8
TPM1-228ENST00000560975 KIAA1586Q9HCI6 787 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 OLFML3Q9NRN5 406 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 SUGT1Q9Y2Z0 365 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 LAMB2P55268 1798 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 MAGEB2O15479 319 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 PLEKHG4Q58EX7 1191 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 LRRC74BQ6ZQY2 392 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 DRAXINQ8NBI3 349 aaPredicted RBP17.53■□□□□ 0.4
TPM1-228ENST00000560975 DENND1AQ8TEH3 1009 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 IFT43Q96FT9 208 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 SAYSD1Q9NPB0 183 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 LRRC4BQ9NT99 713 aa17.53■□□□□ 0.4
TPM1-228ENST00000560975 TBX10O75333 385 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 ZCCHC18P0CG32 403 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 MAGEA4P43358 317 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 NOVP48745 357 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 PDK4Q16654 411 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 TBC1D25Q3MII6 688 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 ZNF365Q70YC5 407 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 CLNKQ7Z7G1 428 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 FAM178BQ8IXR5 827 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 SCYL3Q8IZE3 742 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 GBP5Q96PP8 586 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 SMC6Q96SB8 1091 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 MKNK1Q9BUB5 465 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 DCLK3Q9C098 648 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 PARVGQ9HBI0 331 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 ARL8BQ9NVJ2 186 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 ACTL7BQ9Y614 415 aa17.52■□□□□ 0.4
TPM1-228ENST00000560975 CALCAP01258 141 aa17.52■□□□□ 0.39
TPM1-228ENST00000560975 GAP43P17677 238 aa17.52■□□□□ 0.39
TPM1-228ENST00000560975 SSR1P43307 286 aaKnown RBP17.52■□□□□ 0.39
TPM1-228ENST00000560975 PPP3CAQ08209 521 aa17.52■□□□□ 0.39
TPM1-228ENST00000560975 ARHGAP22Q7Z5H3 698 aa17.52■□□□□ 0.39
TPM1-228ENST00000560975 NBPF5PQ86XG9 351 aaPredicted RBP17.52■□□□□ 0.39
TPM1-228ENST00000560975 EPS8L1Q8TE68 723 aa17.52■□□□□ 0.39
TPM1-228ENST00000560975 MORC4Q8TE76 937 aa17.52■□□□□ 0.39
TPM1-228ENST00000560975 SLCO2A1Q92959 643 aa17.52■□□□□ 0.39
TPM1-228ENST00000560975 EURLQ9NYK6 297 aa17.52■□□□□ 0.39
TPM1-228ENST00000560975 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.52■□□□□ 0.39
TPM1-228ENST00000560975 A0A0G2JND7 137 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 A0A1W2PPM1 405 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 SORBS3O60504 671 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 GCAP28676 217 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 RHBDL3P58872 404 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 RFWD2Q8NHY2 731 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 C12orf65Q9H3J6 166 aaKnown RBP17.51■□□□□ 0.39
TPM1-228ENST00000560975 ALG13Q9NP73 1137 aaKnown RBP17.51■□□□□ 0.39
TPM1-228ENST00000560975 CYP3A7-CYP3A51PA0A087WV96 503 aa17.51■□□□□ 0.39
TPM1-228ENST00000560975 TRAFD1O14545 582 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms