RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 PRR5-ARHGAP8B1AHC4 643 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 ADAM12O43184 909 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 TBC1D4O60343 1298 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 B3GAT3O94766 335 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 ELF1P32519 619 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 ARHGAP8P85298 464 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 LMNB2Q03252 620 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 TRIM29Q14134 588 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 PPP2R5DQ14738 602 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 NOSTRINQ8IVI9 506 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
MARK3-221ENST00000560603 ZBTB44Q8NCP5 570 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 ERMNQ8TAM6 284 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 DEPTORQ8TB45 409 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 CLDN23Q96B33 292 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 AVENQ9NQS1 362 aaPredicted RBP13.28□□□□□ -0.28
MARK3-221ENST00000560603 DNMT3BQ9UBC3 853 aaKnown RBP13.28□□□□□ -0.28
MARK3-221ENST00000560603 SMG5Q9UPR3 1016 aaKnown RBP13.28□□□□□ -0.28
MARK3-221ENST00000560603 GDAQ9Y2T3 454 aa13.28□□□□□ -0.28
MARK3-221ENST00000560603 MTF2Q9Y483 593 aaPredicted RBP13.28□□□□□ -0.28
MARK3-221ENST00000560603 ARHGEF35A5YM69 484 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 MAN2B1O00754 1011 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 LRG1P02750 347 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 RHOP08100 348 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 PTPN2P17706 415 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 LIG1P18858 919 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 CD72P21854 359 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 NAMPTP43490 491 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 EFNA5P52803 228 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 NRLP54845 237 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 ADCY1Q08828 1119 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 NAB2Q15742 525 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 ING5Q8WYH8 240 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 DNASE1L2Q92874 299 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 TNFRSF25Q93038 417 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 ELSPBP1Q96BH3 223 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 MCRS1Q96EZ8 462 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 IFT74Q96LB3 600 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 MTMR9Q96QG7 549 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 EPC1Q9H2F5 836 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 HCFC1R1Q9NWW0 138 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 CDV3Q9UKY7 258 aaKnown RBP13.27□□□□□ -0.29
MARK3-221ENST00000560603 RAB23Q9ULC3 237 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 CDY1Q9Y6F8 540 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 CHD8Q9HCK8 2581 aa13.27□□□□□ -0.29
MARK3-221ENST00000560603 A0A087WWV3 80 aa13.26□□□□□ -0.29
MARK3-221ENST00000560603 PRRG1O14668 218 aa13.26□□□□□ -0.29
MARK3-221ENST00000560603 ZNF197O14709 1029 aa13.26□□□□□ -0.29
MARK3-221ENST00000560603 CYP11B2P19099 503 aa13.26□□□□□ -0.29
MARK3-221ENST00000560603 TARSP26639 723 aaKnown RBP13.26□□□□□ -0.29
MARK3-221ENST00000560603 CATSPER3Q86XQ3 398 aa13.26□□□□□ -0.29
MARK3-221ENST00000560603 DIS3L2Q8IYB7 885 aaKnown RBP13.26□□□□□ -0.29
MARK3-221ENST00000560603 DDX27Q96GQ7 796 aaKnown RBP13.26□□□□□ -0.29
MARK3-221ENST00000560603 IER2Q9BTL4 223 aa13.26□□□□□ -0.29
MARK3-221ENST00000560603 POLR3CQ9BUI4 534 aaPredicted RBP13.26□□□□□ -0.29
MARK3-221ENST00000560603 BRD9Q9H8M2 597 aa13.26□□□□□ -0.29
MARK3-221ENST00000560603 TOPORSQ9NS56 1045 aaPredicted RBP13.26□□□□□ -0.29
MARK3-221ENST00000560603 PPP4R2Q9NY27 417 aa13.26□□□□□ -0.29
MARK3-221ENST00000560603 TPCN1Q9ULQ1 816 aa13.26□□□□□ -0.29
MARK3-221ENST00000560603 ARHGEF37A1IGU5 675 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 LILRB5O75023 590 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 SPATA31C1P0DKV0 1188 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 CLCNKBP51801 687 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 YARSP54577 528 aaKnown RBP13.25□□□□□ -0.29
MARK3-221ENST00000560603 UPP1Q16831 310 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 PADI6Q6TGC4 694 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 ELMOD1Q8N336 334 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 ZNF461Q8TAF7 563 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 NELL1Q92832 810 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 PPP1R10Q96QC0 940 aaKnown RBP13.25□□□□□ -0.29
MARK3-221ENST00000560603 CCDC94Q9BW85 323 aaPredicted RBP13.25□□□□□ -0.29
MARK3-221ENST00000560603 CCDC113Q9H0I3 377 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 ZFP14Q9HCL3 533 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 PRMT8Q9NR22 394 aaPredicted RBP13.25□□□□□ -0.29
MARK3-221ENST00000560603 HEBP1Q9NRV9 189 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 SLC38A7Q9NVC3 462 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 USP18Q9UMW8 372 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 VWA8A3KMH1 1905 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 PATJQ8NI35 1801 aa13.25□□□□□ -0.29
MARK3-221ENST00000560603 BTBD18B2RXH4 712 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 H7C4K7 107 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 MICAL2O94851 1124 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 MUTP22033 750 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 RPA1P27694 616 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 TKTP29401 623 aaKnown RBP13.24□□□□□ -0.29
MARK3-221ENST00000560603 ATXN1P54253 815 aaKnown RBP13.24□□□□□ -0.29
MARK3-221ENST00000560603 SAFBQ15424 915 aaKnown RBP eCLIP13.24□□□□□ -0.29
MARK3-221ENST00000560603 GLRA4Q5JXX5 417 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 CYP4A22Q5TCH4 519 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 ATF7IP2Q5U623 682 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 EEF1DP3Q658K8 133 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 TANGO2Q6ICL3 276 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 SLC8B1Q6J4K2 584 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 BSNDQ8WZ55 320 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 KIFAP3Q92845 792 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 IRF7Q92985 503 aa13.24□□□□□ -0.29
MARK3-221ENST00000560603 RTKNQ9BST9 563 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms