RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 CPDO75976 1380 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 SALL3Q9BXA9 1300 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 ATRNO75882 1429 aa5.21□□□□□ -1.57
TMOD3-207ENST00000560549 NPEPPSL1A6NEC2 478 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 MAFGO15525 162 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 FOXS1O43638 330 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 SH3BP5O60239 455 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 NBPF7P0C2Y1 421 aaPredicted RBP5.21□□□□□ -1.58
TMOD3-207ENST00000560549 PTX3P26022 381 aaPredicted RBP5.21□□□□□ -1.58
TMOD3-207ENST00000560549 LSSP48449 732 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 STAT5BP51692 787 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 GUCY2FP51841 1108 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 KIF11P52732 1056 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 EPHB1P54762 984 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 TMPRSS15P98073 1019 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 DUSP8Q13202 625 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 MOGSQ13724 837 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 EIF4HQ15056 248 aaKnown RBP5.21□□□□□ -1.58
TMOD3-207ENST00000560549 TSHZ3Q63HK5 1081 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 CC2D1AQ6P1N0 951 aaPredicted RBP5.21□□□□□ -1.58
TMOD3-207ENST00000560549 DNAAF4Q8WXU2 420 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 RAPGEF4Q8WZA2 1011 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 CFHR4Q92496 578 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 IL17RAQ96F46 866 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 GPR101Q96P66 508 aaPredicted RBP5.21□□□□□ -1.58
TMOD3-207ENST00000560549 LRRC37BQ96QE4 947 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 TTC1Q99614 292 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 CCDC8Q9H0W5 538 aaPredicted RBP5.21□□□□□ -1.58
TMOD3-207ENST00000560549 MS4A5Q9H3V2 200 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 SEC61A2Q9H9S3 476 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 FAM208AQ9UK61 1670 aaKnown RBP5.21□□□□□ -1.58
TMOD3-207ENST00000560549 OVOS2A0A0G2JMS6 1433 aa5.21□□□□□ -1.58
TMOD3-207ENST00000560549 ALG1L2C9J202 215 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 ZEB2O60315 1214 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 BRINP1O60477 761 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 CUTAO60888 179 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 HIP1RO75146 1068 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 CAND2O75155 1236 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 ALDH1L1O75891 902 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 PRKD3O94806 890 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 PRLP01236 227 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 HMGCRP04035 888 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 GNAI3P08754 354 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 PIP4K2AP48426 406 aaPredicted RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 SCNN1BP51168 640 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 ALDH6A1Q02252 535 aaKnown RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 R3HDM1Q15032 1099 aaKnown RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 LONRF3Q496Y0 759 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 RNF219Q5W0B1 726 aaPredicted RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 TRIM68Q6AZZ1 485 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 TCTN3Q6NUS6 607 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 ESRP1Q6NXG1 681 aaKnown RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 ZNF790Q6PG37 636 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 DPP8Q6V1X1 898 aaPredicted RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 PPP1R42Q7Z4L9 355 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 NECAB2Q7Z6G3 386 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 CIR1Q86X95 450 aaPredicted RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 SPATS2Q86XZ4 545 aaKnown RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 SAMD3Q8N6K7 520 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 SSH3Q8TE77 659 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 USP7Q93009 1102 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 NEIL1Q96FI4 390 aaPredicted RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 ZNF496Q96IT1 587 aaPredicted RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 DPYSL5Q9BPU6 564 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 TMPRSS5Q9H3S3 457 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 CABP5Q9NP86 173 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 JADE2Q9NQC1 790 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 GNL3LQ9NVN8 582 aaKnown RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 APOBEC2Q9Y235 224 aaKnown RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 MAP3K2Q9Y2U5 619 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 USP16Q9Y5T5 823 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 LRP5O75197 1615 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 ADAMTS7Q9UKP4 1686 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 KDM3BQ7LBC6 1761 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 RGPD5Q99666 1765 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 GAS7O60861 476 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 HMMRO75330 724 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 IGKV5-2P06315 115 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 UBTFL1P0CB47 393 aaPredicted RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 PDE1AP54750 535 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 IL2P60568 153 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 AIMP1Q12904 312 aaKnown RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 PCOLCEQ15113 449 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 TTF1Q15361 905 aaPredicted RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 VPS72Q15906 364 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 ZNF585AQ6P3V2 769 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 CLEC4GQ6UXB4 293 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 KSR2Q6VAB6 950 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 CXXC5Q7LFL8 322 aaKnown RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 WDR75Q8IWA0 830 aaKnown RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 IFNL2Q8IZJ0 200 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 CBARPQ8N350 705 aaPredicted RBP5.2□□□□□ -1.58
TMOD3-207ENST00000560549 CLRN3Q8NCR9 226 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 Q8TCH9 128 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 KAZALD1Q96I82 304 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 C16orf92Q96LL3 132 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 LMF1Q96S06 567 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 ARNT2Q9HBZ2 717 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 SLC5A4Q9NY91 659 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 DBF4Q9UBU7 674 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms