RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 FRMD5Q7Z6J6 570 aa13.3□□□□□ -0.28
USP8-209ENST00000560297 PARD3BQ8TEW8 1205 aa13.3□□□□□ -0.28
USP8-209ENST00000560297 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
USP8-209ENST00000560297 EEF2KMTQ96G04 330 aa13.3□□□□□ -0.28
USP8-209ENST00000560297 DDX27Q96GQ7 796 aaKnown RBP13.3□□□□□ -0.28
USP8-209ENST00000560297 PPP1R10Q96QC0 940 aaKnown RBP13.3□□□□□ -0.28
USP8-209ENST00000560297 THAP9Q9H5L6 903 aa13.3□□□□□ -0.28
USP8-209ENST00000560297 PDE11AQ9HCR9 933 aa13.3□□□□□ -0.28
USP8-209ENST00000560297 AAASQ9NRG9 546 aa13.3□□□□□ -0.28
USP8-209ENST00000560297 UBQLN1Q9UMX0 589 aaKnown RBP13.3□□□□□ -0.28
USP8-209ENST00000560297 RWDD3Q9Y3V2 267 aa13.3□□□□□ -0.28
USP8-209ENST00000560297 MICAL3Q7RTP6 2002 aa13.3□□□□□ -0.28
USP8-209ENST00000560297 SMTNL1A8MU46 457 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
USP8-209ENST00000560297 MEFVO15553 781 aaPredicted RBP13.29□□□□□ -0.28
USP8-209ENST00000560297 ALDH7A1P49419 539 aaKnown RBP13.29□□□□□ -0.28
USP8-209ENST00000560297 VAMP7P51809 220 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 ZNF445P59923 1031 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 CLDN10P78369 228 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 MYL5Q02045 173 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 DSC1Q08554 894 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 TUSC3Q13454 348 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 TMEM132DQ14C87 1099 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 DUOXA2Q1HG44 320 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 LRSAM1Q6UWE0 723 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 WDR49Q8IV35 697 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 FAM114A1Q8IWE2 563 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 BEST2Q8NFU1 509 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 CLP1Q92989 425 aaKnown RBP13.29□□□□□ -0.28
USP8-209ENST00000560297 BORCS6Q96GS4 357 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 UROC1Q96N76 676 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 ZMAT2Q96NC0 199 aaKnown RBP13.29□□□□□ -0.28
USP8-209ENST00000560297 TMEM175Q9BSA9 504 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
USP8-209ENST00000560297 ARMCX3Q9UH62 379 aaPredicted RBP13.29□□□□□ -0.28
USP8-209ENST00000560297 STX10O60499 249 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 DDHD2O94830 711 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 DLATP10515 647 aaKnown RBP13.28□□□□□ -0.28
USP8-209ENST00000560297 LAG3P18627 525 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 TNNI1P19237 187 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 RPL9P32969 192 aaKnown RBP13.28□□□□□ -0.28
USP8-209ENST00000560297 MARSP56192 900 aaKnown RBP13.28□□□□□ -0.28
USP8-209ENST00000560297 BFSP1Q12934 665 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 NAB2Q15742 525 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 CCDC40Q4G0X9 1142 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 GLRA4Q5JXX5 417 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 SPOUT1Q5T280 376 aaKnown RBP13.28□□□□□ -0.28
USP8-209ENST00000560297 ZNF280BQ86YH2 543 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 COLGALT2Q8IYK4 626 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 CCDC127Q96BQ5 260 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 ANKRD36BP1Q96IX9 119 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 SAMD11Q96NU1 681 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 CGRRF1Q99675 332 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 CXCL16Q9H2A7 254 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 TSPY26PQ9H489 355 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 CWH43Q9H720 699 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 NRDE2Q9H7Z3 1164 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 SLC28A3Q9HAS3 691 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 INTS13Q9NVM9 706 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 MAGEC2Q9UBF1 373 aaPredicted RBP13.28□□□□□ -0.28
USP8-209ENST00000560297 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 NFE2L3Q9Y4A8 694 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 PCDHB12Q9Y5F1 795 aa13.28□□□□□ -0.28
USP8-209ENST00000560297 MRPL42Q9Y6G3 142 aaKnown RBP13.28□□□□□ -0.28
USP8-209ENST00000560297 LINC01553A4QN01 128 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 BECN2A8MW95 431 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 TNNC2P02585 160 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 CA3P07451 260 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 NFICP08651 508 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 TMEM191BP0C7N4 346 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 MYOGP15173 224 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 PAX3P23760 479 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 GTF2H1P32780 548 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 BMPR1AP36894 532 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 PBX2P40425 430 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 TFAMQ00059 246 aaKnown RBP13.27□□□□□ -0.29
USP8-209ENST00000560297 SPAG1Q07617 926 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 DCLRE1AQ6PJP8 1040 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 ZNF558Q96NG5 402 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 TGS1Q96RS0 853 aaKnown RBP13.27□□□□□ -0.29
USP8-209ENST00000560297 COLEC11Q9BWP8 271 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 PLVAPQ9BX97 442 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 DPP3Q9NY33 737 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 FAN1Q9Y2M0 1017 aa13.27□□□□□ -0.29
USP8-209ENST00000560297 YBX2Q9Y2T7 364 aaKnown RBP13.27□□□□□ -0.29
USP8-209ENST00000560297 R3HCC1Q9Y3T6 440 aaKnown RBP13.27□□□□□ -0.29
USP8-209ENST00000560297 LCHNA4D1U4 455 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 LRRIQ3A6PVS8 624 aaPredicted RBP13.26□□□□□ -0.29
USP8-209ENST00000560297 ZC3H11AO75152 810 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP8-209ENST00000560297 RB1P06400 928 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 GALTP07902 379 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
USP8-209ENST00000560297 DNAJB2P25686 324 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 LRPAP1P30533 357 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 PPM1AP35813 382 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 OR1G1P47890 313 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 WNT7BP56706 349 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 BCAR1P56945 870 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 KCNT2Q6UVM3 1135 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 IRF2BP1Q8IU81 584 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms