RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 SLC41A1Q8IVJ1 513 aa4.87□□□□□ -1.63
LRRC28-218ENST00000560236 BOLLQ8N9W6 283 aaKnown RBP4.87□□□□□ -1.63
LRRC28-218ENST00000560236 SLC9A6Q92581 669 aa4.87□□□□□ -1.63
LRRC28-218ENST00000560236 CEP95Q96GE4 821 aa4.87□□□□□ -1.63
LRRC28-218ENST00000560236 RAPGEF6Q8TEU7 1601 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 CFIP05156 583 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 CTSSP25774 331 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 LSSP48449 732 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 CHN2P52757 468 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 MFSD14BQ5SR56 506 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 PRAMEF14Q5SWL7 426 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 METRNLQ641Q3 311 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 PPM1KQ8N3J5 372 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 SLC44A3Q8N4M1 653 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 OR2W6PQ8NHA6 318 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 ZNF480Q8WV37 535 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 NINJ1Q92982 152 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 PHACTR3Q96KR7 559 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 NEU1Q99519 415 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 SPATA5L1Q9BVQ7 753 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 PRDM12Q9H4Q4 367 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 ATP11BQ9Y2G3 1177 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 CDY2AQ9Y6F7 541 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 SHANK2Q9UPX8 1470 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 MYO3AQ8NEV4 1616 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 RNF17Q9BXT8 1623 aaKnown RBP4.86□□□□□ -1.63
LRRC28-218ENST00000560236 ALKQ9UM73 1620 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 MYO5CQ9NQX4 1742 aa4.86□□□□□ -1.63
LRRC28-218ENST00000560236 DRGXA6NNA5 263 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 CDKL5O76039 1030 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 FOSP01100 380 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-218ENST00000560236 CANXP27824 592 aaKnown RBP4.85□□□□□ -1.63
LRRC28-218ENST00000560236 CRHR1P34998 444 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 MPLP40238 635 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 FLT3LGP49771 235 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 SEPT7Q16181 437 aaKnown RBP4.85□□□□□ -1.63
LRRC28-218ENST00000560236 PITRM1Q5JRX3 1037 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 ATXN7L2Q5T6C5 722 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-218ENST00000560236 AGAP9Q5VTM2 703 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 BROXQ5VW32 411 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 HDGFL2Q7Z4V5 671 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-218ENST00000560236 HOMER1Q86YM7 354 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 AHI1Q8N157 1196 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 FAM98AQ8NCA5 519 aaKnown RBP4.85□□□□□ -1.63
LRRC28-218ENST00000560236 CAGE1Q8TC20 777 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 KCTD10Q9H3F6 313 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 TESQ9UGI8 421 aaKnown RBP4.85□□□□□ -1.63
LRRC28-218ENST00000560236 TLK1Q9UKI8 766 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 NOC2LQ9Y3T9 749 aaKnown RBP4.85□□□□□ -1.63
LRRC28-218ENST00000560236 SYNMO15061 1565 aa4.85□□□□□ -1.63
LRRC28-218ENST00000560236 CEP170BQ9Y4F5 1589 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-218ENST00000560236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.84□□□□□ -1.63
LRRC28-218ENST00000560236 SCAPERQ9BY12 1400 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 MAST3O60307 1309 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 INO80B-WBP1J3KQ70 363 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 FKBP9O95302 570 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 C1RP00736 705 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 FDXRP22570 491 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 PTPN7P35236 360 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 ADCYAP1R1P41586 468 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 LGALS4P56470 323 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 SPDYE7PQ495Y7 208 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 C16orf86Q6ZW13 317 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 FKBP9P1Q75LS8 142 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 GLCCI1Q86VQ1 547 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 MAPKAPK5Q8IW41 473 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 RHOT2Q8IXI1 618 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 NIM1KQ8IY84 436 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 OR56A1Q8NGH5 318 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 SLC35B2Q8TB61 432 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 SREK1Q8WXA9 508 aaKnown RBP4.84□□□□□ -1.63
LRRC28-218ENST00000560236 PAWRQ96IZ0 340 aaKnown RBP4.84□□□□□ -1.63
LRRC28-218ENST00000560236 RNPC3Q96LT9 517 aaKnown RBP4.84□□□□□ -1.63
LRRC28-218ENST00000560236 LRFN3Q9BTN0 628 aa4.84□□□□□ -1.63
LRRC28-218ENST00000560236 INO80BQ9C086 356 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-218ENST00000560236 KDM5CP41229 1560 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 DIP2CQ9Y2E4 1556 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 ZNF518AQ6AHZ1 1483 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 RPTORQ8N122 1335 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 PLEKHD1A6NEE1 506 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 PJA2O43164 708 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 ADCY6O43306 1168 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 LPLP06858 475 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 CLRN1P58418 232 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 TKFCQ3LXA3 575 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 CCDC144BQ3MJ40 725 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 FAM47AQ5JRC9 791 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 TSHZ3Q63HK5 1081 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 DHX37Q8IY37 1157 aaKnown RBP4.83□□□□□ -1.64
LRRC28-218ENST00000560236 SLC5A5Q92911 643 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 Q96MF0 132 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 DUSP26Q9BV47 211 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 TARS2Q9BW92 718 aaKnown RBP4.83□□□□□ -1.64
LRRC28-218ENST00000560236 KIAA1586Q9HCI6 787 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 ALG13Q9NP73 1137 aaKnown RBP4.83□□□□□ -1.64
LRRC28-218ENST00000560236 EMC7Q9NPA0 242 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 NOX1Q9Y5S8 564 aa4.83□□□□□ -1.64
LRRC28-218ENST00000560236 SALL3Q9BXA9 1300 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 PHF2O75151 1096 aa4.82□□□□□ -1.64
LRRC28-218ENST00000560236 SNRPA1P09661 255 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms