RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 LGR5O75473 907 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 FARP2O94887 1054 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 CYP1A1P04798 512 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 POTEJP0CG39 1038 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 DLATP10515 647 aaKnown RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 UNGP13051 313 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 COMTP21964 271 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 HSD17B3P37058 310 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 PIK3CAP42336 1068 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 PTGIRP43119 386 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 IREB2P48200 963 aaKnown RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 IRAK1P51617 712 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 SOX10P56693 466 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 RWDD2BP57060 319 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 CNTN2Q02246 1040 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 CENPCQ03188 943 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 VGLL4Q14135 290 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 PTPROQ16827 1216 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 LIN9Q5TKA1 542 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 PRAMEF18Q5VWM3 479 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 CRELD2Q6UXH1 353 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 SYDE1Q6ZW31 735 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 PRRT2Q7Z6L0 340 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 JAMLQ86YT9 394 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 BRSK2Q8IWQ3 736 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 MCOLN2Q8IZK6 566 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 ASAP3Q8TDY4 903 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 ATP8B4Q8TF62 1192 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 SEPT1Q8WYJ6 367 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 SLCO2A1Q92959 643 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 TATDN2Q93075 761 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 PCYT2Q99447 389 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 FMO2Q99518 471 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 POP1Q99575 1024 aaKnown RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 HINFPQ9BQA5 517 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 TXLNGYQ9BZA5 131 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 SPATC1LQ9H0A9 340 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 C2orf40Q9H1Z8 148 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 TMBIM4Q9HC24 238 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 NMRK2Q9NPI5 230 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 ADARB2Q9NS39 739 aaKnown RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 RBAKQ9NYW8 714 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 RNF181Q9P0P0 153 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 BTBD7Q9P203 1132 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 CNOT8Q9UFF9 292 aaKnown RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 EVPLQ92817 2033 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 RALGAPA2Q2PPJ7 1873 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 CNTNAP2Q9UHC6 1331 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 H0YGN5 161 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 FSCN2O14926 492 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 EIF3HO15372 352 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 TOMM70O94826 608 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 VNN1O95497 513 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 CLTAP09496 248 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 MYZAPP0CAP1 466 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 KRT5P13647 590 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 TNNI1P19237 187 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 NR1D1P20393 614 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 ACO1P21399 889 aaKnown RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 MAN1A1P33908 653 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 SLC26A2P50443 739 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 STAT5BP51692 787 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 NLRP11P59045 1033 aaKnown RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 IRX3P78415 501 aaPredicted RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 SP4Q02446 784 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 CUL2Q13617 745 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 MXD4Q14582 209 aaPredicted RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 UAP1Q16222 522 aaPredicted RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 TDRD10Q5VZ19 366 aaKnown RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 CDCA2Q69YH5 1023 aaPredicted RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 METTL7BQ6UX53 244 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 SEPT14Q6ZU15 432 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 TRMT1LQ7Z2T5 733 aaKnown RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 ERO1BQ86YB8 467 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 SLC13A5Q86YT5 568 aaPredicted RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 WDR49Q8IV35 697 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 PRELID2Q8N945 189 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 BBXQ8WY36 941 aaPredicted RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 KRT35Q92764 455 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 TMEM143Q96AN5 459 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 DCPSQ96C86 337 aaKnown RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 FAXDC2Q96IV6 333 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 MSTO1Q9BUK6 570 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 MRPL4Q9BYD3 311 aaKnown RBP8.65□□□□□ -1.02
SMAD3-212ENST00000559937 FAM107BQ9H098 131 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 NEUROG2Q9H2A3 272 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 LRRC19Q9H756 370 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 ERVK-5Q9HDB9 667 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 ZDHHC18Q9NUE0 388 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 KCNH4Q9UQ05 1017 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 NFS1Q9Y697 457 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 SCINQ9Y6U3 715 aa8.65□□□□□ -1.02
SMAD3-212ENST00000559937 GRIN2DO15399 1336 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 PASKQ96RG2 1323 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 IGKV6-21A0A0C4DH24 114 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 SPDYE5A6NIY4 337 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 TMEM110-MUSTN1A8MSY1 372 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 OGTO15294 1046 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 PSTPIP1O43586 416 aa8.64□□□□□ -1.03
SMAD3-212ENST00000559937 TOM1L1O75674 476 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms