RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SLC39A11Q8N1S5 342 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 TRIML1Q8N9V2 468 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 XXYLT1Q8NBI6 393 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 OR5B17Q8NGF7 314 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 GDPD5Q8WTR4 605 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 NELFBQ8WX92 580 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 ARNTL2Q8WYA1 636 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
TPM1-217ENST00000559108 BORCS6Q96GS4 357 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 GUCD1Q96NT3 240 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
TPM1-217ENST00000559108 RBAKQ9NYW8 714 aaPredicted RBP11.85□□□□□ -0.51
TPM1-217ENST00000559108 REV3LO60673 3130 aa11.85□□□□□ -0.51
TPM1-217ENST00000559108 C5orf67F2Z3F1 127 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 NRP1O14786 923 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 KIF4AO95239 1232 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 NR2F2P24468 414 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 CTNNB1P35222 781 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 CLCNKBP51801 687 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 CYP24A1Q07973 514 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 TUSC3Q13454 348 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 NFIL3Q16649 462 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 HS2ST1Q7LGA3 356 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 KLHL23Q8NBE8 558 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 URGCPQ8TCY9 931 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 ELMO3Q96BJ8 720 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 DHTKD1Q96HY7 919 aaPredicted RBP11.84□□□□□ -0.51
TPM1-217ENST00000559108 B3GALT6Q96L58 329 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 MFSD14AQ96MC6 490 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 TGS1Q96RS0 853 aaKnown RBP11.84□□□□□ -0.51
TPM1-217ENST00000559108 RPS6KC1Q96S38 1066 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 MRPL9Q9BYD2 267 aaKnown RBP11.84□□□□□ -0.51
TPM1-217ENST00000559108 PRDM12Q9H4Q4 367 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 RPF1Q9H9Y2 349 aaKnown RBP11.84□□□□□ -0.51
TPM1-217ENST00000559108 SLC28A3Q9HAS3 691 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 ALG13Q9NP73 1137 aaKnown RBP11.84□□□□□ -0.51
TPM1-217ENST00000559108 UBN1Q9NPG3 1134 aa11.84□□□□□ -0.51
TPM1-217ENST00000559108 PRG3Q9Y2Y8 225 aaPredicted RBP11.84□□□□□ -0.51
TPM1-217ENST00000559108 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
TPM1-217ENST00000559108 SPTLC1O15269 473 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 EXOC3O60645 756 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 CSPG5O95196 566 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 THP07101 528 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 IRS1P35568 1242 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 YARSP54577 528 aaKnown RBP11.83□□□□□ -0.52
TPM1-217ENST00000559108 SNRPFP62306 86 aaKnown RBP11.83□□□□□ -0.52
TPM1-217ENST00000559108 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 EDRF1Q3B7T1 1238 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 TAS1R1Q7RTX1 841 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 APBB1IPQ7Z5R6 666 aaPredicted RBP11.83□□□□□ -0.52
TPM1-217ENST00000559108 IRF2BP1Q8IU81 584 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 HACE1Q8IYU2 909 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 RNF168Q8IYW5 571 aaPredicted RBP11.83□□□□□ -0.52
TPM1-217ENST00000559108 HASPINQ8TF76 798 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 CCDC127Q96BQ5 260 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 PLEKHA5Q9HAU0 1116 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 CGNQ9P2M7 1197 aaKnown RBP11.83□□□□□ -0.52
TPM1-217ENST00000559108 SIX4Q9UIU6 781 aa11.83□□□□□ -0.52
TPM1-217ENST00000559108 PRRC2BQ5JSZ5 2229 aaKnown RBP11.83□□□□□ -0.52
TPM1-217ENST00000559108 SYCE3A1L190 88 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 I3L4J1 428 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 CALUO43852 315 aaPredicted RBP11.82□□□□□ -0.52
TPM1-217ENST00000559108 LRRN2O75325 713 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 FGF18O76093 207 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 TRIM49P0CI25 452 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 TRIM49CP0CI26 452 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 LAG3P18627 525 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 BRCC3P46736 316 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 OR1G1P47890 313 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 MCCD1P59942 119 aaPredicted RBP11.82□□□□□ -0.52
TPM1-217ENST00000559108 RNASELQ05823 741 aaKnown RBP11.82□□□□□ -0.52
TPM1-217ENST00000559108 PAK1Q13153 545 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 ADAM9Q13443 819 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 PSMD6Q15008 389 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 UPP1Q16831 310 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 SPATA1Q5VX52 437 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 CEP135Q66GS9 1140 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 C1orf127Q8N9H9 656 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 FBXO22Q8NEZ5 403 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 GOLGA5Q8TBA6 731 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 SPPL3Q8TCT6 385 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 IGSF21Q96ID5 467 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 ZNF558Q96NG5 402 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 TMEM175Q9BSA9 504 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 GPR62Q9BZJ7 368 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 MTMR12Q9C0I1 747 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 KANSL3Q9P2N6 904 aa11.82□□□□□ -0.52
TPM1-217ENST00000559108 TMEM265A0A087WTH1 108 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 ANO9A1A5B4 782 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 ZNF233A6NK53 670 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 H3BNC9 293 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 PSMA7O14818 248 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 KIAA0391O15091 583 aaKnown RBP11.81□□□□□ -0.52
TPM1-217ENST00000559108 LDHAP00338 332 aaKnown RBP11.81□□□□□ -0.52
TPM1-217ENST00000559108 LRPAP1P30533 357 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 ERVFC1P60507 584 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 CLDN10P78369 228 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms