RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 C17orf75Q9HAS0 396 aa12.97□□□□□ -0.33
SEMA4B-205ENST00000558848 CDH7Q9ULB5 785 aa12.97□□□□□ -0.33
SEMA4B-205ENST00000558848 NOL7Q9UMY1 257 aaKnown RBP12.97□□□□□ -0.33
SEMA4B-205ENST00000558848 NUMBLQ9Y6R0 609 aa12.97□□□□□ -0.33
SEMA4B-205ENST00000558848 DCHS1Q96JQ0 3298 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 VWA8A3KMH1 1905 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 PP2D1A8MPX8 630 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 KCNE1P15382 129 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 OR1D2P34982 312 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 STARD6P59095 220 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 NTHL1P78549 312 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 ANGPT1Q15389 498 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 PPM1LQ5SGD2 360 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 RINT1Q6NUQ1 792 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 PARM1Q6UWI2 310 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 GET4Q7L5D6 327 aaPredicted RBP12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 FRMD5Q7Z6J6 570 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 FAM184AQ8NB25 1140 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 FGF13Q92913 245 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 DDX27Q96GQ7 796 aaKnown RBP12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 ZMAT2Q96NC0 199 aaKnown RBP12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 RUSC1Q9BVN2 902 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 RAB34Q9BZG1 259 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 GOLGA2P5Q9HBQ8 144 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 AVENQ9NQS1 362 aaPredicted RBP12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 RBM19Q9Y4C8 960 aaKnown RBP12.96□□□□□ -0.33
SEMA4B-205ENST00000558848 PTPRZ1P23471 2315 aaPredicted RBP12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 HIP1RO75146 1068 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 XYLBO75191 536 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 ABLIM3O94929 683 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 MCF2P10911 925 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 LIG1P18858 919 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 GUCY2CP25092 1073 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 TKTP29401 623 aaKnown RBP12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 CDC25AP30304 524 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 PEX3P56589 373 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 MRPL58Q14197 206 aaKnown RBP12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 TMEM132AQ24JP5 1023 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 LIN9Q5TKA1 542 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 KRT79Q5XKE5 535 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 POTEHQ6S545 545 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 ANKS3Q6ZW76 656 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 APBB1IPQ7Z5R6 666 aaPredicted RBP12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 ITFG1Q8TB96 612 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 SLC7A14Q8TBB6 771 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 SPIRE2Q8WWL2 714 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 SNX27Q96L92 541 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 DRC1Q96MC2 740 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 DDX23Q9BUQ8 820 aaKnown RBP12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 TIPINQ9BVW5 301 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 TARS2Q9BW92 718 aaKnown RBP12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 MRPL4Q9BYD3 311 aaKnown RBP12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 TBC1D17Q9HA65 648 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 ARHGEF3Q9NR81 526 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 TOPORSQ9NS56 1045 aaPredicted RBP12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 DNMT3BQ9UBC3 853 aaKnown RBP12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 KCNH3Q9ULD8 1083 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 CDY1Q9Y6F8 540 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 GVINP1Q7Z2Y8 2422 aa12.95□□□□□ -0.34
SEMA4B-205ENST00000558848 ARHGEF37A1IGU5 675 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 CCL16O15467 120 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 TRAPPC3O43617 180 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 BRCC3P46736 316 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 GPC5P78333 572 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 ATP2C1P98194 919 aaPredicted RBP12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 DMP1Q13316 513 aaPredicted RBP12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 GNL2Q13823 731 aaKnown RBP12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 DTHD1Q6ZMT9 781 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 NPAS3Q8IXF0 933 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 ZNF461Q8TAF7 563 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 NKD2Q969F2 451 aaPredicted RBP12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 CCDC94Q9BW85 323 aaPredicted RBP12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 SLC38A7Q9NVC3 462 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 HCFC1R1Q9NWW0 138 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 CA14Q9ULX7 337 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 FAM186AA6NE01 2351 aa12.94□□□□□ -0.34
SEMA4B-205ENST00000558848 NOTCH4Q99466 2003 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 CCDC169A6NNP5 214 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 SYN3O14994 580 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 GLULP15104 373 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 RPL9P32969 192 aaKnown RBP12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 YARSP54577 528 aaKnown RBP12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 ROR1Q01973 937 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 ZNF568Q3ZCX4 644 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 RILPL1Q5EBL4 403 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 MPZL3Q6UWV2 235 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 MTSS1LQ765P7 747 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 SYT2Q8N9I0 419 aaPredicted RBP12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 TMEM161BQ8NDZ6 487 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 PNMA5Q96PV4 448 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 KMT5AQ9NQR1 393 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 KCND2Q9NZV8 630 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 SIT1Q9Y3P8 196 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 ZNF292O60281 2723 aa12.93□□□□□ -0.34
SEMA4B-205ENST00000558848 WDR87Q6ZQQ6 2873 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms