RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 PLK5Q496M5 336 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 PROSER1Q86XN7 944 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 SMARCD2Q92925 531 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 OSBPL3Q9H4L5 887 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 TRPV5Q9NQA5 729 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 SLC12A7Q9Y666 1083 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 CDY1Q9Y6F8 540 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 PI4KAP42356 2102 aa13.25□□□□□ -0.29
SMAD3-206ENST00000558739 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 PATE3B3GLJ2 98 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 B4GALT5O43286 388 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 ERLIN2O94905 339 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 JAK3P52333 1124 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 CREB5Q02930 508 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 PON2Q15165 354 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 LRCH2Q5VUJ6 765 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 MIER3Q7Z3K6 550 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 SRGAP1Q7Z6B7 1085 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 GPIHBP1Q8IV16 184 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 HS6ST3Q8IZP7 471 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 RNF149Q8NC42 400 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 SLC5A5Q92911 643 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 ZFYVE19Q96K21 471 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 AVENQ9NQS1 362 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-206ENST00000558739 SNTG2Q9NY99 539 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 GIT1Q9Y2X7 761 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 MSRB2Q9Y3D2 182 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 NEUROG3Q9Y4Z2 214 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 PCDHGA5Q9Y5G8 931 aa13.24□□□□□ -0.29
SMAD3-206ENST00000558739 SPAARA0A1B0GVQ0 90 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 SPECC1L-ADORA2AF8WAN1 911 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 I3L4J1 428 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-206ENST00000558739 ZNF263O14978 683 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 CEACAM1P13688 526 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 CTHP32929 405 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 CIITAP33076 1130 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-206ENST00000558739 AMHR2Q16671 573 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 UVSSAQ2YD98 709 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 CNNM3Q8NE01 707 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 ZSCAN18Q8TBC5 510 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-206ENST00000558739 CSRNP2Q9H175 543 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 DUSP15Q9H1R2 295 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-206ENST00000558739 GTSE1Q9NYZ3 720 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 WRAP73Q9P2S5 460 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-206ENST00000558739 MTRRQ9UBK8 725 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 TEX15Q9BXT5 2789 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 TRIP11Q15643 1979 aa13.23□□□□□ -0.29
SMAD3-206ENST00000558739 THADAQ6YHU6 1953 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 HEPACAM2A8MVW5 462 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 PTGESO14684 152 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 PSMD10O75832 226 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 NPTXRO95502 500 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 CAVIN2O95810 425 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 PRB1P04280 392 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 CSRP1P21291 193 aaKnown RBP13.22□□□□□ -0.29
SMAD3-206ENST00000558739 TKTP29401 623 aaKnown RBP13.22□□□□□ -0.29
SMAD3-206ENST00000558739 SFNP31947 248 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 LIFRP42702 1097 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 KPNA1P52294 538 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-206ENST00000558739 NAB2Q15742 525 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 UAP1L1Q3KQV9 507 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 DAB2IPQ5VWQ8 1189 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 NOTUMQ6P988 496 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 REXO1Q8N1G1 1221 aaKnown RBP13.22□□□□□ -0.29
SMAD3-206ENST00000558739 ZC3H10Q96K80 434 aaKnown RBP13.22□□□□□ -0.29
SMAD3-206ENST00000558739 LRRC3BQ96PB8 259 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 HHIPQ96QV1 700 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 TEKT3Q9BXF9 490 aa13.22□□□□□ -0.29
SMAD3-206ENST00000558739 MYBPHLA2RUH7 354 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 SEC24AO95486 1093 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
SMAD3-206ENST00000558739 PTPN2P17706 415 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 ARF4P18085 180 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-206ENST00000558739 MCM5P33992 734 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 FGD1P98174 961 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 ROR1Q01973 937 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 TUSC3Q13454 348 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 APOA5Q6Q788 366 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 B3GNT9Q6UX72 402 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 DEPDC1BQ8WUY9 529 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 PSPC1Q8WXF1 523 aaKnown RBP13.21□□□□□ -0.29
SMAD3-206ENST00000558739 DDX27Q96GQ7 796 aaKnown RBP13.21□□□□□ -0.29
SMAD3-206ENST00000558739 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 TMEM87BQ96K49 555 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 RIT2Q99578 217 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 TRIM6Q9C030 488 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-206ENST00000558739 TMEM9BQ9NQ34 198 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 PARP2Q9UGN5 583 aa13.21□□□□□ -0.29
SMAD3-206ENST00000558739 RBM8AQ9Y5S9 174 aaKnown RBP13.21□□□□□ -0.29
SMAD3-206ENST00000558739 PTPRQQ9UMZ3 2332 aa13.21□□□□□ -0.3
SMAD3-206ENST00000558739 ARHGEF37A1IGU5 675 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 BCLAF3A2AJT9 711 aaKnown RBP13.2□□□□□ -0.3
SMAD3-206ENST00000558739 LRG1P02750 347 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 PRKCBP05771 671 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 FGFR3P22607 806 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 CDC27P30260 824 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms