RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 GOLGA5Q8TBA6 731 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 NOC3LQ8WTT2 800 aaKnown RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 TIFAQ96CG3 184 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 SNX27Q96L92 541 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 RPS6KC1Q96S38 1066 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 FAM213AQ9BRX8 229 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 MRPL9Q9BYD2 267 aaKnown RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 RPF1Q9H9Y2 349 aaKnown RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 TOPORSQ9NS56 1045 aaPredicted RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 TBC1D13Q9NVG8 400 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 TRAF3IP3Q9Y228 551 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 LACTBL1A8MY62 500 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 PTGESO14684 152 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 KIAA0391O15091 583 aaKnown RBP11.3□□□□□ -0.6
PSMA4-207ENST00000558635 CALUO43852 315 aaPredicted RBP11.3□□□□□ -0.6
PSMA4-207ENST00000558635 EXTL3O43909 919 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 DDHD2O94830 711 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 TAP1Q03518 808 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 RNASELQ05823 741 aaKnown RBP11.3□□□□□ -0.6
PSMA4-207ENST00000558635 ZCWPW2Q504Y3 356 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 XKR4Q5GH76 650 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 SPOUT1Q5T280 376 aaKnown RBP11.3□□□□□ -0.6
PSMA4-207ENST00000558635 PPP2R2DQ66LE6 453 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 CENPPQ6IPU0 288 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 KLHL10Q6JEL2 608 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 ZNF280BQ86YH2 543 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 LRRC43Q8N309 656 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 GPD1LQ8N335 351 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 RSPH1Q8WYR4 309 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 DHTKD1Q96HY7 919 aaPredicted RBP11.3□□□□□ -0.6
PSMA4-207ENST00000558635 CWH43Q9H720 699 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 SLC28A3Q9HAS3 691 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 DMAC2Q9NW81 257 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 PLAGL2Q9UPG8 496 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 CHD9Q3L8U1 2897 aa11.3□□□□□ -0.6
PSMA4-207ENST00000558635 SMIM28A0A1B0GU29 152 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 PSMA7O14818 248 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 B4GALT3O60512 393 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 NR3C1P04150 777 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 THP07101 528 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 ADRB2P07550 413 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 LINC00271P0C7V0 271 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 KCNE1P15382 129 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 CCNE1P24864 410 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 PPP1R2P41236 205 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 PMS1P54277 932 aaKnown RBP11.29□□□□□ -0.6
PSMA4-207ENST00000558635 NLRP12P59046 1061 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 PPP2R3AQ06190 1150 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 GRIK3Q13003 919 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 SKOR2Q2VWA4 1001 aaPredicted RBP11.29□□□□□ -0.6
PSMA4-207ENST00000558635 GLRA4Q5JXX5 417 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 CBWD2Q8IUF1 395 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 SLC9A9Q8IVB4 645 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 XXYLT1Q8NBI6 393 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 RDH13Q8NBN7 331 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 NELFBQ8WX92 580 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
PSMA4-207ENST00000558635 P2RX5Q93086 422 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 SYAP1Q96A49 352 aaPredicted RBP11.29□□□□□ -0.6
PSMA4-207ENST00000558635 FBXL18Q96ME1 805 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 ZMAT2Q96NC0 199 aaKnown RBP11.29□□□□□ -0.6
PSMA4-207ENST00000558635 FAM193BQ96PV7 902 aaPredicted RBP11.29□□□□□ -0.6
PSMA4-207ENST00000558635 PPP1R10Q96QC0 940 aaKnown RBP11.29□□□□□ -0.6
PSMA4-207ENST00000558635 TGS1Q96RS0 853 aaKnown RBP11.29□□□□□ -0.6
PSMA4-207ENST00000558635 TSG101Q99816 390 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 C17orf80Q9BSJ5 609 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 NRDE2Q9H7Z3 1164 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 CERS4Q9HA82 394 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 KIAA1586Q9HCI6 787 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 CNTN3Q9P232 1028 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 MTUS1Q9ULD2 1270 aa11.29□□□□□ -0.6
PSMA4-207ENST00000558635 TRIM49BA6NDI0 452 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 ZNF233A6NK53 670 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 EXOC3O60645 756 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 ZC3H11AO75152 810 aaKnown RBP eCLIP11.28□□□□□ -0.6
PSMA4-207ENST00000558635 NR2F2P24468 414 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 CTNNB1P35222 781 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 BMPR1AP36894 532 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 PBX3P40426 434 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 CASP4P49662 377 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 WNT7BP56706 349 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 STX17P56962 302 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 ERVK-21P61565 698 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 POU5F1Q01860 360 aaKnown RBP11.28□□□□□ -0.6
PSMA4-207ENST00000558635 SPAG1Q07617 926 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 ADAM9Q13443 819 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 MYBPC2Q14324 1141 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 NAB2Q15742 525 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
PSMA4-207ENST00000558635 NFIL3Q16649 462 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 EDRF1Q3B7T1 1238 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 JADE1Q6IE81 842 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 BRSK2Q8IWQ3 736 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 CD302Q8IX05 232 aa11.28□□□□□ -0.6
PSMA4-207ENST00000558635 COLGALT2Q8IYK4 626 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms