RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 GRID2IPA4D2P6 1211 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 M0R3G1 203 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 SESN2P58004 480 aaPredicted RBP14.69□□□□□ -0.06
SPG11-210ENST00000558319 NDUFAF2Q8N183 169 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 PRPF18Q99633 342 aaKnown RBP14.69□□□□□ -0.06
SPG11-210ENST00000558319 RGL1Q9NZL6 768 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 AIPL1Q9NZN9 384 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 TTC26A0AVF1 554 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 PHKA2P46019 1235 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 SEC24CP53992 1094 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 ACSF2Q96CM8 615 aaPredicted RBP14.69□□□□□ -0.06
SPG11-210ENST00000558319 KCNF1Q9H3M0 494 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 CAAP1Q9H8G2 361 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 DOLKQ9UPQ8 538 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 ANO9A1A5B4 782 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 ANGPT2O15123 496 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 PDE5AO76074 875 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 CYP2B6P20813 491 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 AARS2Q5JTZ9 985 aaKnown RBP14.69□□□□□ -0.06
SPG11-210ENST00000558319 TRPM8Q7Z2W7 1104 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 MIF4GDA9UHW6 222 aaKnown RBP14.69□□□□□ -0.06
SPG11-210ENST00000558319 CHRNA3P32297 505 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 VAMP7P51809 220 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 TRIM16LQ309B1 348 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 RTKN2Q8IZC4 609 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 LXNQ9BS40 222 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 METP08581 1390 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 IMPDH2P12268 514 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 CCND1P24385 295 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 PPARGP37231 505 aaPredicted RBP14.68□□□□□ -0.06
SPG11-210ENST00000558319 NAIF1Q69YI7 327 aaPredicted RBP14.68□□□□□ -0.06
SPG11-210ENST00000558319 PHF21AQ96BD5 680 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 L3MBTL3Q96JM7 780 aaPredicted RBP14.68□□□□□ -0.06
SPG11-210ENST00000558319 SKAP2O75563 359 aaPredicted RBP14.68□□□□□ -0.06
SPG11-210ENST00000558319 CLK1P49759 484 aaKnown RBP14.68□□□□□ -0.06
SPG11-210ENST00000558319 ORC1Q13415 861 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 R3HDM1Q15032 1099 aaKnown RBP14.68□□□□□ -0.06
SPG11-210ENST00000558319 MFSD4BQ5TF39 518 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 IYDQ6PHW0 289 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 TLK2Q86UE8 772 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 COPRSQ9NQ92 184 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 STAP2Q9UGK3 403 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 MINPP1Q9UNW1 487 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 RSPH10B2B2RC85 870 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 SPTLC1O15269 473 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 RSPH10BP0C881 870 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 TXNRD1Q16881 649 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 EFHBQ8N7U6 833 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 RIN3Q8TB24 985 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 SRPK1Q96SB4 655 aaKnown RBP14.68□□□□□ -0.06
SPG11-210ENST00000558319 TMA7Q9Y2S6 64 aaKnown RBP14.68□□□□□ -0.06
SPG11-210ENST00000558319 SPDYE5A6NIY4 337 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 ZCCHC18P0CG32 403 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 SPDYE7PQ495Y7 208 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 DAB2IPQ5VWQ8 1189 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 BTBD8Q5XKL5 378 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 TMEM179Q6ZVK1 233 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 FAM160B2Q86V87 743 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 RNF149Q8NC42 400 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 PGBD4Q96DM1 585 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 AGBL1Q96MI9 1066 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 TRIM8Q9BZR9 551 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 NDEL1Q9GZM8 345 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 ASNSD1Q9NWL6 643 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 EFCAB14O75071 495 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 EPB42P16452 691 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 NMT1P30419 496 aaKnown RBP14.68□□□□□ -0.06
SPG11-210ENST00000558319 HS6ST3Q8IZP7 471 aa14.68□□□□□ -0.06
SPG11-210ENST00000558319 ZBTB5O15062 677 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 TMCC1O94876 653 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 CDC27P30260 824 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 PSMD7P51665 324 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 HEATR6Q6AI08 1181 aaKnown RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 LAYNQ6UX15 382 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 RAD54LQ92698 747 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 FAM136AQ96C01 138 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 CYP26B1Q9NR63 512 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 PNMA8BQ9ULN7 279 aaPredicted RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 HSPA1AP0DMV8 641 aaKnown RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 HSPA1BP0DMV9 641 aaKnown RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 WASHC5Q12768 1159 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 DRAP1Q14919 205 aaPredicted RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 VMP1Q96GC9 406 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 SHCBP1LQ9BZQ2 653 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 INTS2Q9H0H0 1204 aaKnown RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 TMEM245Q9H330 911 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 RERGLQ9H628 205 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 MAD2L2Q9UI95 211 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 FAM47DPA6NHR8 397 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 GNAT1P11488 350 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 SLC9A1P19634 815 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 TARSP26639 723 aaKnown RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 LSP1P33241 339 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 BSDC1Q9NW68 430 aaPredicted RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 MKL2Q9ULH7 1088 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 AFF2P51816 1311 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 PPP1R18Q6NYC8 613 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 MTERF3Q96E29 417 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 PLEKHF1Q96S99 279 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms