RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 PRG3Q9Y2Y8 225 aaPredicted RBP18.2■□□□□ 0.5
PBX4-202ENST00000557978 SCN1AP35498 2009 aa18.2■□□□□ 0.5
PBX4-202ENST00000557978 EYSQ5T1H1 3165 aa18.2■□□□□ 0.5
PBX4-202ENST00000557978 LACTBL1A8MY62 500 aa18.19■□□□□ 0.5
PBX4-202ENST00000557978 CALUO43852 315 aaPredicted RBP18.19■□□□□ 0.5
PBX4-202ENST00000557978 IL18RAPO95256 599 aa18.19■□□□□ 0.5
PBX4-202ENST00000557978 DDX53Q86TM3 631 aaKnown RBP18.19■□□□□ 0.5
PBX4-202ENST00000557978 XXYLT1Q8NBI6 393 aa18.19■□□□□ 0.5
PBX4-202ENST00000557978 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
PBX4-202ENST00000557978 KIF12Q96FN5 646 aa18.19■□□□□ 0.5
PBX4-202ENST00000557978 DDX27Q96GQ7 796 aaKnown RBP18.19■□□□□ 0.5
PBX4-202ENST00000557978 KCTD10Q9H3F6 313 aa18.19■□□□□ 0.5
PBX4-202ENST00000557978 UBQLN1Q9UMX0 589 aaKnown RBP18.19■□□□□ 0.5
PBX4-202ENST00000557978 DERAQ9Y315 318 aa18.19■□□□□ 0.5
PBX4-202ENST00000557978 BRWD1Q9NSI6 2320 aa18.19■□□□□ 0.5
PBX4-202ENST00000557978 MTCL1Q9Y4B5 1905 aaKnown RBP18.19■□□□□ 0.5
PBX4-202ENST00000557978 CASTOR2A6NHX0 329 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 ZNF233A6NK53 670 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 CLIC2O15247 247 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 MEFVO15553 781 aaPredicted RBP18.18■□□□□ 0.5
PBX4-202ENST00000557978 CYP3A5P20815 502 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 PPP1R2P41236 205 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 STIM1Q13586 685 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 TIGD5Q53EQ6 642 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 COBLL1Q53SF7 1204 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 NT5DC4Q86YG4 428 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 BRSK2Q8IWQ3 736 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 MICAL1Q8TDZ2 1067 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 TMEM174Q8WUU8 243 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 PPP2R3CQ969Q6 453 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 RBAKQ9NYW8 714 aaPredicted RBP18.18■□□□□ 0.5
PBX4-202ENST00000557978 ADAM28Q9UKQ2 775 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 MAPK8IP1Q9UQF2 711 aa18.18■□□□□ 0.5
PBX4-202ENST00000557978 GOLGA8IPA6NC78 632 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 GOLGA8JA6NMD2 632 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 TADA2AO75478 443 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 DNAJB1P25685 340 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 RPL9P32969 192 aaKnown RBP18.17■□□□□ 0.5
PBX4-202ENST00000557978 MYBPC2Q14324 1141 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 SURF1Q15526 300 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 CAMK4Q16566 473 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 DCLRE1AQ6PJP8 1040 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 TMC7Q7Z402 723 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 TMEM173Q86WV6 379 aaPredicted RBP18.17■□□□□ 0.5
PBX4-202ENST00000557978 SLC9A9Q8IVB4 645 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 FBXL18Q96ME1 805 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 NGRNQ9NPE2 291 aaKnown RBP18.17■□□□□ 0.5
PBX4-202ENST00000557978 KIAA1468Q9P260 1216 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 TRAF3IP3Q9Y228 551 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 C2CD2Q9Y426 696 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 PRUNE2Q8WUY3 3088 aa18.17■□□□□ 0.5
PBX4-202ENST00000557978 EXOC3O60645 756 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 CYP2J2P51589 502 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 CLCNKBP51801 687 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 SPAG1Q07617 926 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 CAMK1Q14012 370 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 TMEM132DQ14C87 1099 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 ZBTB6Q15916 424 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 UPP1Q16831 310 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 JADE1Q6IE81 842 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 TRIML1Q8N9V2 468 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 BEST2Q8NFU1 509 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 PAAF1Q9BRP4 392 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 CLSTN2Q9H4D0 955 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 NSUN3Q9H649 340 aaKnown RBP18.16■□□□□ 0.5
PBX4-202ENST00000557978 GOLGA2P5Q9HBQ8 144 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 ENTPD7Q9NQZ7 604 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 MARCH5Q9NX47 278 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 MAN1B1Q9UKM7 699 aa18.16■□□□□ 0.5
PBX4-202ENST00000557978 TMEM189-UBE2V1I3L0A0 370 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 MBD3O95983 291 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 RPL13P26373 211 aaKnown RBP18.15■□□□□ 0.5
PBX4-202ENST00000557978 PRCPP42785 496 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 ERVFC1P60507 584 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 SOX4Q06945 474 aaPredicted RBP18.15■□□□□ 0.5
PBX4-202ENST00000557978 ELAVL2Q12926 359 aaKnown RBP18.15■□□□□ 0.5
PBX4-202ENST00000557978 SNRNP35Q16560 246 aaKnown RBP18.15■□□□□ 0.5
PBX4-202ENST00000557978 NFIL3Q16649 462 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 SMYD4Q8IYR2 804 aaPredicted RBP18.15■□□□□ 0.5
PBX4-202ENST00000557978 VPS52Q8N1B4 723 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 MICALL1Q8N3F8 863 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 RDH13Q8NBN7 331 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 ZSWIM2Q8NEG5 633 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 CACTINQ8WUQ7 758 aaKnown RBP18.15■□□□□ 0.5
PBX4-202ENST00000557978 BCL7CQ8WUZ0 217 aaPredicted RBP18.15■□□□□ 0.5
PBX4-202ENST00000557978 C18orf25Q96B23 403 aaPredicted RBP18.15■□□□□ 0.5
PBX4-202ENST00000557978 TCF25Q9BQ70 676 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 NUP62CLQ9H1M0 184 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 SF3B1O75533 1304 aaKnown RBP eCLIP18.15■□□□□ 0.51e-13■■■■■ 310.2
PBX4-202ENST00000557978 PODXLO00592 558 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 TRAPPC3O43617 180 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 B3GAT3O94766 335 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 KIF4AO95239 1232 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 NR3C1P04150 777 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 SOD2P04179 222 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 CTSAP10619 480 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 LRPAP1P30533 357 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 SMC1AQ14683 1233 aaKnown RBP18.15■□□□□ 0.5
PBX4-202ENST00000557978 SPATA1Q5VX52 437 aa18.15■□□□□ 0.5
PBX4-202ENST00000557978 ISM2Q6H9L7 571 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms