RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 TOP1P11387 765 aaKnown RBP6.56□□□□□ -1.36
TRPM1-204ENST00000557948 GRM5P41594 1212 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 PXNP49023 591 aaPredicted RBP6.56□□□□□ -1.36
TRPM1-204ENST00000557948 RPIAP49247 311 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 CSRP3P50461 194 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 HSD17B4P51659 736 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 NTHL1P78549 312 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 RNASELQ05823 741 aaKnown RBP6.56□□□□□ -1.36
TRPM1-204ENST00000557948 ZNF543Q08ER8 600 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 DSC3Q14574 896 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 OCLNQ16625 522 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 PLK5Q496M5 336 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 STOX1Q6ZVD7 989 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 FAM228AQ86W67 206 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 PALB2Q86YC2 1186 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 ZNF513Q8N8E2 541 aaPredicted RBP6.56□□□□□ -1.36
TRPM1-204ENST00000557948 TRAPPC12Q8WVT3 735 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 FCRL3Q96P31 734 aaPredicted RBP6.56□□□□□ -1.36
TRPM1-204ENST00000557948 RPS6KC1Q96S38 1066 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 MYCBPQ99417 103 aaPredicted RBP6.56□□□□□ -1.36
TRPM1-204ENST00000557948 PLA2G2FQ9BZM2 168 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 DUSP15Q9H1R2 295 aaPredicted RBP6.56□□□□□ -1.36
TRPM1-204ENST00000557948 SMARCAD1Q9H4L7 1026 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 PRORYQ9H606 182 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 EPB41L4AQ9HCS5 686 aaPredicted RBP6.56□□□□□ -1.36
TRPM1-204ENST00000557948 CYLDQ9NQC7 956 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 RBM12Q9NTZ6 932 aaKnown RBP6.56□□□□□ -1.36
TRPM1-204ENST00000557948 DKK4Q9UBT3 224 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 PIAS3Q9Y6X2 628 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 THADAQ6YHU6 1953 aa6.56□□□□□ -1.36
TRPM1-204ENST00000557948 PI4KAP42356 2102 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 ATMQ13315 3056 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 CCDC163A0A0D9SF12 145 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 FIBPO43427 364 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 RANBP6O60518 1105 aaKnown RBP6.55□□□□□ -1.36
TRPM1-204ENST00000557948 GNAT2P19087 354 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 CCNE1P24864 410 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 U2AF2P26368 475 aaKnown RBP eCLIP6.55□□□□□ -1.36
TRPM1-204ENST00000557948 HOXC13P31276 330 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 MAPK8P45983 427 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 SLC11A1P49279 550 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 LMAN2Q12907 356 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 PLCB4Q15147 1175 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 MTHFD1LQ6UB35 978 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 Q6ZS52 159 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 CAPN12Q6ZSI9 719 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 PIP4P1Q86T03 277 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 GOLGA6L1Q8N7Z2 621 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 GIMAP8Q8ND71 665 aaPredicted RBP6.55□□□□□ -1.36
TRPM1-204ENST00000557948 ZNF397Q8NF99 534 aaPredicted RBP6.55□□□□□ -1.36
TRPM1-204ENST00000557948 KIF18AQ8NI77 898 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 ITFG1Q8TB96 612 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 SEPT1Q8WYJ6 367 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 RSPH1Q8WYR4 309 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 IRF7Q92985 503 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 CDK15Q96Q40 435 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 PPP1R16BQ96T49 567 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 OSMRQ99650 979 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 NCAPGQ9BPX3 1015 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 TMEM47Q9BQJ4 181 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 GBP3Q9H0R5 595 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 OSBPL3Q9H4L5 887 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 NRDE2Q9H7Z3 1164 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 C2orf42Q9NWW7 574 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 MAP3K20Q9NYL2 800 aaKnown RBP6.55□□□□□ -1.36
TRPM1-204ENST00000557948 CWC15Q9P013 229 aaKnown RBP6.55□□□□□ -1.36
TRPM1-204ENST00000557948 NXF1Q9UBU9 619 aaKnown RBP6.55□□□□□ -1.36
TRPM1-204ENST00000557948 FEZ2Q9UHY8 353 aaPredicted RBP6.55□□□□□ -1.36
TRPM1-204ENST00000557948 POLIQ9UNA4 740 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 COL4A2P08572 1712 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 ABCA7Q8IZY2 2146 aa6.55□□□□□ -1.36
TRPM1-204ENST00000557948 SALL3Q9BXA9 1300 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 TEX51A0A1B0GUA7 166 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 CCDC194A0A1B0GVG4 234 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 UPK3BL1B0FP48 263 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 TMEM229AB2RXF0 380 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 PATE3B3GLJ2 98 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 B8ZZF3 427 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 UPK3BL2E5RIL1 263 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 SIAH2O43255 324 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 TGM5O43548 720 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 SLC28A2O43868 658 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 KIF1CO43896 1103 aaKnown RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 DHX16O60231 1041 aaKnown RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 STAM2O75886 525 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 CD2BP2O95400 341 aaKnown RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 C1RP00736 705 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 SOD2P04179 222 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 GOLGA8HP0CJ92 632 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 HOXA13P31271 388 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 TNNT3P45378 269 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 NOVP48745 357 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 GLUD2P49448 558 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 CRYBB1P53674 252 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 IRX4P78413 519 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 PPARAQ07869 468 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 CYP4F3Q08477 520 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 HNRNPDQ14103 355 aaKnown RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 GRM2Q14416 872 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 KIZQ2M2Z5 673 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms