RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZNF484Q5JVG2 852 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 OLFML2BQ68BL8 750 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 CDCA2Q69YH5 1023 aaPredicted RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 IQCEQ6IPM2 695 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 SYT10Q6XYQ8 523 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 INTS8Q75QN2 995 aaKnown RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 TMEM151AQ8N4L1 468 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 SMC1BQ8NDV3 1235 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 OR6J1Q8NGC5 347 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 SYN2Q92777 582 aaPredicted RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 LENG1Q96BZ8 264 aaPredicted RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 SCARF2Q96GP6 870 aaPredicted RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 TARS2Q9BW92 718 aaKnown RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 INTS2Q9H0H0 1204 aaKnown RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 SUGCTQ9HAC7 445 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 TOPORSQ9NS56 1045 aaPredicted RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 ZNHIT6Q9NWK9 470 aaKnown RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 ERAP1Q9NZ08 941 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 AIPL1Q9NZN9 384 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 GCNT4Q9P109 453 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 SUCLA2Q9P2R7 463 aaPredicted RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 TRIM10Q9UDY6 481 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 KCNG1Q9UIX4 513 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 ABT1Q9ULW3 272 aaKnown RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 TFR2Q9UP52 801 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 GNEQ9Y223 722 aaKnown RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 A0A0B4J269 797 aa8□□□□□ -1.13
SPG11-204ENST00000557866 LRRIQ3A6PVS8 624 aaPredicted RBP8□□□□□ -1.13
SPG11-204ENST00000557866 EIF3CLB5ME19 914 aaKnown RBP8□□□□□ -1.13
SPG11-204ENST00000557866 K7ERI5 159 aa8□□□□□ -1.13
SPG11-204ENST00000557866 ABLIM1O14639 778 aa8□□□□□ -1.13
SPG11-204ENST00000557866 HNRNPDLO14979 420 aaKnown RBP8□□□□□ -1.13
SPG11-204ENST00000557866 PMM2O15305 246 aa8□□□□□ -1.13
SPG11-204ENST00000557866 DYNC1LI2O43237 492 aaPredicted RBP8□□□□□ -1.13
SPG11-204ENST00000557866 CA12O43570 354 aa8□□□□□ -1.13
SPG11-204ENST00000557866 GAS2O43903 313 aaKnown RBP8□□□□□ -1.13
SPG11-204ENST00000557866 EXTL3O43909 919 aa8□□□□□ -1.13
SPG11-204ENST00000557866 PPFIA4O75335 1185 aa8□□□□□ -1.13
SPG11-204ENST00000557866 SRGAP2CP0DJJ0 459 aa8□□□□□ -1.13
SPG11-204ENST00000557866 SKIP12755 728 aa8□□□□□ -1.13
SPG11-204ENST00000557866 CYP2C19P33261 490 aa8□□□□□ -1.13
SPG11-204ENST00000557866 GCLMP48507 274 aa8□□□□□ -1.13
SPG11-204ENST00000557866 GSK3AP49840 483 aa8□□□□□ -1.13
SPG11-204ENST00000557866 CLCN3P51790 818 aa8□□□□□ -1.13
SPG11-204ENST00000557866 NLRP11P59045 1033 aaKnown RBP8□□□□□ -1.13
SPG11-204ENST00000557866 IGBP1P78318 339 aa8□□□□□ -1.13
SPG11-204ENST00000557866 MYL7Q01449 175 aa8□□□□□ -1.13
SPG11-204ENST00000557866 TNFAIP2Q03169 654 aa8□□□□□ -1.13
SPG11-204ENST00000557866 SREBF2Q12772 1141 aa8□□□□□ -1.13
SPG11-204ENST00000557866 SNRNP35Q16560 246 aaKnown RBP8□□□□□ -1.13
SPG11-204ENST00000557866 EML3Q32P44 896 aa8□□□□□ -1.13
SPG11-204ENST00000557866 EPC2Q52LR7 807 aa8□□□□□ -1.13
SPG11-204ENST00000557866 EFHC2Q5JST6 749 aa8□□□□□ -1.13
SPG11-204ENST00000557866 ZBTB41Q5SVQ8 909 aa8□□□□□ -1.13
SPG11-204ENST00000557866 SFMBT2Q5VUG0 894 aa8□□□□□ -1.13
SPG11-204ENST00000557866 CYP4F22Q6NT55 531 aa8□□□□□ -1.13
SPG11-204ENST00000557866 EFCAB12Q6NXP0 572 aa8□□□□□ -1.13
SPG11-204ENST00000557866 CRELD2Q6UXH1 353 aaPredicted RBP8□□□□□ -1.13
SPG11-204ENST00000557866 CACNA2D4Q7Z3S7 1137 aa8□□□□□ -1.13
SPG11-204ENST00000557866 IRF2BP2Q7Z5L9 587 aa8□□□□□ -1.13
SPG11-204ENST00000557866 CCDC170Q8IYT3 715 aa8□□□□□ -1.13
SPG11-204ENST00000557866 OLIG1Q8TAK6 271 aa8□□□□□ -1.13
SPG11-204ENST00000557866 PARD3BQ8TEW8 1205 aa8□□□□□ -1.13
SPG11-204ENST00000557866 TCP11Q8WWU5 503 aa8□□□□□ -1.13
SPG11-204ENST00000557866 PSPC1Q8WXF1 523 aaKnown RBP8□□□□□ -1.13
SPG11-204ENST00000557866 POMGNT1Q8WZA1 660 aa8□□□□□ -1.13
SPG11-204ENST00000557866 SEMA4DQ92854 862 aa8□□□□□ -1.13
SPG11-204ENST00000557866 BICD1Q96G01 975 aa8□□□□□ -1.13
SPG11-204ENST00000557866 HHIPL1Q96JK4 782 aa8□□□□□ -1.13
SPG11-204ENST00000557866 ZNF668Q96K58 619 aaPredicted RBP8□□□□□ -1.13
SPG11-204ENST00000557866 FAM84AQ96KN4 292 aa8□□□□□ -1.13
SPG11-204ENST00000557866 WDR24Q96S15 920 aa8□□□□□ -1.13
SPG11-204ENST00000557866 POP1Q99575 1024 aaKnown RBP8□□□□□ -1.13
SPG11-204ENST00000557866 EIF3CQ99613 913 aaKnown RBP8□□□□□ -1.13
SPG11-204ENST00000557866 FAM213AQ9BRX8 229 aa8□□□□□ -1.13
SPG11-204ENST00000557866 ARHGAP39Q9C0H5 1083 aa8□□□□□ -1.13
SPG11-204ENST00000557866 GPR88Q9GZN0 384 aa8□□□□□ -1.13
SPG11-204ENST00000557866 TMEM117Q9H0C3 514 aa8□□□□□ -1.13
SPG11-204ENST00000557866 SLC5A4Q9NY91 659 aa8□□□□□ -1.13
SPG11-204ENST00000557866 FBXL5Q9UKA1 691 aa8□□□□□ -1.13
SPG11-204ENST00000557866 SSU72P8A0A1W2PR75 194 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 GOLGA6L9A6NEM1 432 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 H3BRB1 525 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 KIF2AO00139 706 aaPredicted RBP7.99□□□□□ -1.13
SPG11-204ENST00000557866 P4HA2O15460 535 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 MSCO60682 206 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 AOC2O75106 756 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 LCA5LO95447 670 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 SERPING1P05155 500 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 PNMA6AP0CW24 399 aaPredicted RBP7.99□□□□□ -1.13
SPG11-204ENST00000557866 SCP2P22307 547 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 KLRC1P26715 233 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 ABCD1P33897 745 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 CYLC1P35663 651 aaPredicted RBP7.99□□□□□ -1.13
SPG11-204ENST00000557866 RGS2P41220 211 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 MAP2K3P46734 347 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 LIG4P49917 911 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 KIF11P52732 1056 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 PTENP60484 403 aa7.99□□□□□ -1.13
SPG11-204ENST00000557866 CYP27A1Q02318 531 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms