RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 IL9RQ01113 521 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 UBAP2Q5T6F2 1119 aaKnown RBP17.37■□□□□ 0.37
SHMT2-232ENST00000557487 KRT39Q6A163 491 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 SH3BP5LQ7L8J4 393 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 NIPA1Q7RTP0 329 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 CCDC89Q8N998 374 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 BANK1Q8NDB2 785 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 KREMEN1Q96MU8 473 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 TGS1Q96RS0 853 aaKnown RBP17.37■□□□□ 0.37
SHMT2-232ENST00000557487 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-232ENST00000557487 DEFB129Q9H1M3 183 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 WRAP73Q9P2S5 460 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-232ENST00000557487 ANAPC5Q9UJX4 755 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 MYH11P35749 1972 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 PLA2G6O60733 806 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 ENTPD3O75355 529 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 DLATP10515 647 aaKnown RBP17.37■□□□□ 0.37
SHMT2-232ENST00000557487 ITGA8P53708 1063 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 LRRC14Q15048 493 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 PPM1KQ8N3J5 372 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 NT5C1BQ96P26 610 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 DCLK3Q9C098 648 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 PPCSQ9HAB8 311 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 ARHGEF10LQ9HCE6 1279 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 TMEM8AQ9HCN3 771 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 ADAMTSL1Q8N6G6 1762 aa17.37■□□□□ 0.37
SHMT2-232ENST00000557487 FAM196BA6NMK8 535 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 IPO5O00410 1097 aaKnown RBP17.36■□□□□ 0.37
SHMT2-232ENST00000557487 NDC80O14777 642 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 MAGEB2O15479 319 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 LUC7L3O95232 432 aaKnown RBP17.36■□□□□ 0.37
SHMT2-232ENST00000557487 CHRM1P11229 460 aaPredicted RBP17.36■□□□□ 0.37
SHMT2-232ENST00000557487 MAPK4P31152 587 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 PSEN1P49768 467 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 TCP10Q12799 353 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 PARP6Q2NL67 630 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 ACCSLQ4AC99 568 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 SPDYAQ5MJ70 313 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 SLC47A2Q86VL8 602 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 ZNF677Q86XU0 584 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 MGARPQ8TDB4 240 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 TMC2Q8TDI7 906 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 CHURC1Q8WUH1 139 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 CBWD1Q9BRT8 395 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 RANBP17Q9H2T7 1088 aaKnown RBP17.36■□□□□ 0.37
SHMT2-232ENST00000557487 PCIF1Q9H4Z3 704 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 NINJ2Q9NZG7 142 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 SLX4Q8IY92 1834 aa17.36■□□□□ 0.37
SHMT2-232ENST00000557487 E7ENQ6 273 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 ZC3H11AO75152 810 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHMT2-232ENST00000557487 UNC5CO95185 931 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 NAA25Q14CX7 972 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 CLEC16AQ2KHT3 1053 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 SHROOM1Q2M3G4 852 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-232ENST00000557487 STRIP1Q5VSL9 837 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 CHADLQ6NUI6 762 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 RGS9BPQ6ZS82 235 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 OTUD6AQ7L8S5 288 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 MIER3Q7Z3K6 550 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 C1orf54Q8WWF1 131 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 MXRA8Q9BRK3 442 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 SERPINA10Q9UK55 444 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 STARD13Q9Y3M8 1113 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 ATMINO43313 823 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-232ENST00000557487 GDF11O95390 407 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 CHKAP35790 457 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 ADCY8P40145 1251 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 SETDB1Q15047 1291 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 CCNG2Q16589 344 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 CC2D2BQ6DHV5 1058 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 HAUS6Q7Z4H7 955 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 FITM2Q8N6M3 262 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 ANKRD42Q8N9B4 389 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 HELQQ8TDG4 1101 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 DDX1Q92499 740 aaKnown RBP17.35■□□□□ 0.37
SHMT2-232ENST00000557487 DHX38Q92620 1227 aaKnown RBP17.35■□□□□ 0.37
SHMT2-232ENST00000557487 FAM212AQ96EL1 285 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 TRIM6Q9C030 488 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-232ENST00000557487 SENP1Q9P0U3 644 aa17.35■□□□□ 0.37
SHMT2-232ENST00000557487 LTBP3Q9NS15 1303 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 PSTPIP1O43586 416 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 GH2P01242 217 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 RPSAP08865 295 aaKnown RBP17.34■□□□□ 0.37
SHMT2-232ENST00000557487 ARP10275 920 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 SCP2P22307 547 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 NCKAP1LP55160 1127 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 KYNUQ16719 465 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 PPP1R2P3Q6NXS1 205 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 TDRPQ86YL5 185 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 AGGF1Q8N302 714 aaeCLIP17.34■□□□□ 0.37
SHMT2-232ENST00000557487 KAT5Q92993 513 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 TTC25Q96NG3 672 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 TMEM237Q96Q45 408 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 EURLQ9NYK6 297 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 RPL26L1Q9UNX3 145 aaKnown RBP17.34■□□□□ 0.37
SHMT2-232ENST00000557487 NEU2Q9Y3R4 380 aa17.34■□□□□ 0.37
SHMT2-232ENST00000557487 FAM47DPA6NHR8 397 aa17.33■□□□□ 0.37
SHMT2-232ENST00000557487 KRT16P08779 473 aa17.33■□□□□ 0.37
SHMT2-232ENST00000557487 SLURP2P0DP57 97 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms