RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 VPS52Q8N1B4 723 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 MICAL1Q8TDZ2 1067 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 HASPINQ8TF76 798 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 ZMAT2Q96NC0 199 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 PAAF1Q9BRP4 392 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 FAM213AQ9BRX8 229 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 PCIF1Q9H4Z3 704 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 PLEKHA5Q9HAU0 1116 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 GOLGA2P5Q9HBQ8 144 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 CPSF3Q9UKF6 684 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 PCDHGC5Q9Y5F6 944 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 C5orf42Q9H799 3197 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 GOLGA8IPA6NC78 632 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 GOLGA8JA6NMD2 632 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 TULP1O00294 542 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 KIF4AO95239 1232 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 SMC2O95347 1197 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 CLCNKBP51801 687 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 ERVFC1P60507 584 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 SOX4Q06945 474 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 KNOP1Q1ED39 458 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 TCEAL5Q5H9L2 206 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 TMC7Q7Z402 723 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 DDX53Q86TM3 631 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 GPD1LQ8N335 351 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 ZSWIM2Q8NEG5 633 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 ERCC4Q92889 916 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 SMARCE1Q969G3 411 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 PPP2R3CQ969Q6 453 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 C18orf25Q96B23 403 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 KIF12Q96FN5 646 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 UROC1Q96N76 676 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 VN1R3Q9BXE9 311 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 AGPAT3Q9NRZ7 376 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 RMND1Q9NWS8 449 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 TUBGCP4Q9UGJ1 667 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 ADAM28Q9UKQ2 775 aa11.51□□□□□ -0.57
HNRNPC-232ENST00000557442 SF3B1O75533 1304 aaKnown RBP eCLIP11.5□□□□□ -0.575e-6■■■■■ 59.2
HNRNPC-232ENST00000557442 LACTBL1A8MY62 500 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 FSCN2O14926 492 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 KIAA0391O15091 583 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 CLIC2O15247 247 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 TGFB1I1O43294 461 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 XPOTO43592 962 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 EXTL3O43909 919 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 KIF20AO95235 890 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 LDHAP00338 332 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 NFICP08651 508 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 CYP2J2P51589 502 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 SMC1AQ14683 1233 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 BMS1Q14692 1282 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 TMEM132DQ14C87 1099 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 JADE1Q6IE81 842 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 PDE12Q6L8Q7 609 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 FUT10Q6P4F1 479 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 CRELD2Q6UXH1 353 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 ADGRD2Q7Z7M1 963 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 CD302Q8IX05 232 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 GSDMAQ96QA5 445 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 ZBP1Q9H171 429 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 RBAKQ9NYW8 714 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 HSPBP1Q9NZL4 362 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 STK39Q9UEW8 545 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 UBQLN1Q9UMX0 589 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 MAPK8IP1Q9UQF2 711 aa11.5□□□□□ -0.57
HNRNPC-232ENST00000557442 MYH10P35580 1976 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 HIDE1A8MVS5 230 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 GOLGA6L22H0YM25 854 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 PODXLO00592 558 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 TADA2AO75478 443 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 B3GAT3O94766 335 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 IL18RAPO95256 599 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 SOD2P04179 222 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 URODP06132 367 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 CTSAP10619 480 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 GLUD2P49448 558 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 SNRPFP62306 86 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 UPP1Q16831 310 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 RBM23Q86U06 439 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 BRSK2Q8IWQ3 736 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 ELOA2Q8IYF1 753 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 GOLGA5Q8TBA6 731 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 AUTS2Q8WXX7 1259 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 DDX27Q96GQ7 796 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 TSPAN18Q96SJ8 248 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 HERC2P3Q9BVR0 1158 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 GPR62Q9BZJ7 368 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 ASB7Q9H672 318 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 NGRNQ9NPE2 291 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 CGNQ9P2M7 1197 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 PCDHA5Q9Y5H7 936 aa11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-232ENST00000557442 C2orf71A6NGG8 1288 aa11.48□□□□□ -0.57
HNRNPC-232ENST00000557442 TMEM189-UBE2V1I3L0A0 370 aa11.48□□□□□ -0.57
HNRNPC-232ENST00000557442 C2CD2LO14523 706 aa11.48□□□□□ -0.57
HNRNPC-232ENST00000557442 ADRB2P07550 413 aa11.48□□□□□ -0.57
HNRNPC-232ENST00000557442 GTF2F1P35269 517 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms