RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PABPC1LQ4VXU2 614 aaKnown RBP15.52■□□□□ 0.08
SLIRP-210ENST00000557431 SLC44A4Q53GD3 710 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.52■□□□□ 0.08
SLIRP-210ENST00000557431 PPP1R10Q96QC0 940 aaKnown RBP15.52■□□□□ 0.08
SLIRP-210ENST00000557431 NACC1Q96RE7 527 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 C2orf40Q9H1Z8 148 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 SPATA6Q9NWH7 488 aaPredicted RBP15.52■□□□□ 0.08
SLIRP-210ENST00000557431 MTRRQ9UBK8 725 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 DENND4CQ5VZ89 1909 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 ZNF292O60281 2723 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 XYLBO75191 536 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 C1RP00736 705 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 CEBPBP17676 345 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 CYP11B2P19099 503 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 FGFR3P22607 806 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 TARSP26639 723 aaKnown RBP15.51■□□□□ 0.07
SLIRP-210ENST00000557431 NAMPTP43490 491 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 ARPP19P56211 112 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 RAB33AQ14088 237 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 ANKRD1Q15327 319 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 TSSK4Q6SA08 328 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 ERMP1Q7Z2K6 904 aa15.51■□□□□ 0.07
SLIRP-210ENST00000557431 POLR3CQ9BUI4 534 aaPredicted RBP15.51■□□□□ 0.07
SLIRP-210ENST00000557431 TSC2P49815 1807 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 FAM170BA6NMN3 283 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 OR52Z1P0C646 297 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 NEK4P51957 841 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 ROR1Q01973 937 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 CSTF1Q05048 431 aaKnown RBP15.5■□□□□ 0.07
SLIRP-210ENST00000557431 ATF7IP2Q5U623 682 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 TPRG1Q6ZUI0 275 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 MTSS1LQ765P7 747 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 CCDC83Q8IWF9 413 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 SUMF1Q8NBK3 374 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 TCEAL4Q96EI5 215 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 DDX23Q9BUQ8 820 aaKnown RBP15.5■□□□□ 0.07
SLIRP-210ENST00000557431 BHMT2Q9H2M3 363 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 LTB4R2Q9NPC1 389 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 HEBP1Q9NRV9 189 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 MRPS23Q9Y3D9 190 aaKnown RBP15.5■□□□□ 0.07
SLIRP-210ENST00000557431 ZFP37Q9Y6Q3 630 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-210ENST00000557431 SPTBN2O15020 2390 aa15.5■□□□□ 0.07
SLIRP-210ENST00000557431 NUP210Q8TEM1 1887 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-210ENST00000557431 WDR27A2RRH5 827 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 RHOP08100 348 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 HARSP12081 509 aaKnown RBP15.49■□□□□ 0.07
SLIRP-210ENST00000557431 RPA1P27694 616 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 HOXA9P31269 272 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 CCT6AP40227 531 aaKnown RBP15.49■□□□□ 0.07
SLIRP-210ENST00000557431 ANAPC15P60006 121 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 ELAVL2Q12926 359 aaKnown RBP15.49■□□□□ 0.07
SLIRP-210ENST00000557431 GRM2Q14416 872 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 UPP1Q16831 310 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 DCAF4L1Q3SXM0 396 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 TANGO2Q6ICL3 276 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 ZC3H14Q6PJT7 736 aaKnown RBP15.49■□□□□ 0.07
SLIRP-210ENST00000557431 SHDQ96IW2 340 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 ZMAT2Q96NC0 199 aaKnown RBP15.49■□□□□ 0.07
SLIRP-210ENST00000557431 CDT1Q9H211 546 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 SCN1AP35498 2009 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 CACNA1AO00555 2505 aa15.49■□□□□ 0.07
SLIRP-210ENST00000557431 OBSL1O75147 1896 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 SHISA7A6NL88 538 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 PP2D1A8MPX8 630 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 E9PMD0 336 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 TMEM189-UBE2V1I3L0A0 370 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 MEFVO15553 781 aaPredicted RBP15.48■□□□□ 0.07
SLIRP-210ENST00000557431 LAMTOR5O43504 91 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 SEC24AO95486 1093 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 PEX3P56589 373 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 ZNF568Q3ZCX4 644 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 SEZ6Q53EL9 994 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 TTC38Q5R3I4 469 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 TAS1R3Q7RTX0 852 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 DGLUCYQ7Z3D6 616 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 ERMNQ8TAM6 284 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 CORO1BQ9BR76 489 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 BCO2Q9BYV7 579 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 SEMA4AQ9H3S1 761 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 KIAA1024Q9UPX6 916 aa15.48■□□□□ 0.07
SLIRP-210ENST00000557431 NCANO14594 1321 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 SDK1Q7Z5N4 2213 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 SMIM28A0A1B0GU29 152 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 CCDC169A6NNP5 214 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 KINO60870 393 aaKnown RBP15.47■□□□□ 0.07
SLIRP-210ENST00000557431 NEFLP07196 543 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 GJA1P17302 382 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 CCR2P41597 374 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 PRKCQQ04759 706 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 PPP2R5AQ15172 486 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 VARS2Q5ST30 1063 aaKnown RBP15.47■□□□□ 0.07
SLIRP-210ENST00000557431 PDXDC1Q6P996 788 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 HS6ST3Q8IZP7 471 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 DAW1Q8N136 415 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 RUBCNQ92622 972 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 C18orf25Q96B23 403 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-210ENST00000557431 C8orf76Q96K31 380 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 ZBTB45Q96K62 511 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-210ENST00000557431 IFT74Q96LB3 600 aa15.47■□□□□ 0.07
SLIRP-210ENST00000557431 TARS2Q9BW92 718 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms