RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 NOTUMQ6P988 496 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 OTUD6AQ7L8S5 288 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 TPH2Q8IWU9 490 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 EXOC8Q8IYI6 725 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 C4orf32Q8N8J7 132 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 FAM184AQ8NB25 1140 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 LNX1Q8TBB1 728 aaPredicted RBP11.18□□□□□ -0.62
APEX1-218ENST00000557344 PIK3R5Q8WYR1 880 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 DDX1Q92499 740 aaKnown RBP11.18□□□□□ -0.62
APEX1-218ENST00000557344 CCDC51Q96ER9 411 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 PLA2G2FQ9BZM2 168 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 CSRNP2Q9H175 543 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 CHRDQ9H2X0 955 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 XPNPEP1Q9NQW7 623 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 HCFC1R1Q9NWW0 138 aa11.18□□□□□ -0.62
APEX1-218ENST00000557344 DNMT3BQ9UBC3 853 aaKnown RBP11.18□□□□□ -0.62
APEX1-218ENST00000557344 SF3B1O75533 1304 aaKnown RBP eCLIP11.17□□□□□ -0.62
APEX1-218ENST00000557344 ASAP2O43150 1006 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 ADAM12O43184 909 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 GDF9O60383 454 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 TRAPPC10P48553 1259 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 GRIK3Q13003 919 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 ORC2Q13416 577 aaPredicted RBP11.17□□□□□ -0.62
APEX1-218ENST00000557344 PPP2R5DQ14738 602 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 EMC2Q15006 297 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 PCBP1Q15365 356 aaKnown RBP eCLIP11.17□□□□□ -0.62
APEX1-218ENST00000557344 ZNF174Q15697 407 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 UVSSAQ2YD98 709 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 PABPC1LQ4VXU2 614 aaKnown RBP11.17□□□□□ -0.62
APEX1-218ENST00000557344 XKR9Q5GH70 373 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 TTC38Q5R3I4 469 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 AXDND1Q5T1B0 1012 aaPredicted RBP11.17□□□□□ -0.62
APEX1-218ENST00000557344 PRR23BQ6ZRT6 265 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 FERMT3Q86UX7 667 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 RNF149Q8NC42 400 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 SLC7A14Q8TBB6 771 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 ING5Q8WYH8 240 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 DNASE1L2Q92874 299 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 CPB2Q96IY4 423 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 IER2Q9BTL4 223 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 TTPALQ9BTX7 342 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 APOL6Q9BWW8 343 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 NXF3Q9H4D5 531 aaKnown RBP11.17□□□□□ -0.62
APEX1-218ENST00000557344 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
APEX1-218ENST00000557344 ANKEF1Q9NU02 776 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 GDE1Q9NZC3 331 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 CACNG4Q9UBN1 327 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 NDRG2Q9UN36 371 aaKnown RBP11.17□□□□□ -0.62
APEX1-218ENST00000557344 F5P12259 2224 aa11.17□□□□□ -0.62
APEX1-218ENST00000557344 CNOT1A5YKK6 2376 aaKnown RBP11.17□□□□□ -0.62
APEX1-218ENST00000557344 NOTCH4Q99466 2003 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 FAM208BQ5VWN6 2430 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 TDRD15B5MCY1 1934 aaKnown RBP11.16□□□□□ -0.62
APEX1-218ENST00000557344 A0A087WWV3 80 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 MAN2B1O00754 1011 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 HRO43593 1189 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 FOXD2O60548 495 aaPredicted RBP11.16□□□□□ -0.62
APEX1-218ENST00000557344 OR52Z1P0C646 297 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 XRCC6P12956 609 aaKnown RBP eCLIP11.16□□□□□ -0.62
APEX1-218ENST00000557344 AKAP5P24588 427 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 RARRES1P49788 294 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 CCR3P51677 355 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 PTENP60484 403 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 NCBP1Q09161 790 aaKnown RBP11.16□□□□□ -0.62
APEX1-218ENST00000557344 SIM2Q14190 667 aaPredicted RBP11.16□□□□□ -0.62
APEX1-218ENST00000557344 HSP90AA2PQ14568 343 aaPredicted RBP11.16□□□□□ -0.62
APEX1-218ENST00000557344 NBR1Q14596 966 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 PSMD5Q16401 504 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 N4BP2L1Q5TBK1 243 aaPredicted RBP11.16□□□□□ -0.62
APEX1-218ENST00000557344 FAM171A1Q5VUB5 890 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 TANGO2Q6ICL3 276 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 POTEHQ6S545 545 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 RTL10Q7L3V2 364 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 CATSPER3Q86XQ3 398 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 HACE1Q8IYU2 909 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 TCP11Q8WWU5 503 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 ELSPBP1Q96BH3 223 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 MCRS1Q96EZ8 462 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 MTRQ99707 1265 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 PAAF1Q9BRP4 392 aa11.16□□□□□ -0.62
APEX1-218ENST00000557344 UPF2Q9HAU5 1272 aaKnown RBP11.16□□□□□ -0.62
APEX1-218ENST00000557344 MRPS23Q9Y3D9 190 aaKnown RBP11.16□□□□□ -0.62
APEX1-218ENST00000557344 TM4SF5O14894 197 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 MED24O75448 989 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 DGAT1O75907 488 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 KCNA4P22459 653 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 ARL2P36404 184 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 RAB33AQ14088 237 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 CEP57Q86XR8 500 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
APEX1-218ENST00000557344 PIGOQ8TEQ8 1089 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 POLR3CQ9BUI4 534 aaPredicted RBP11.15□□□□□ -0.62
APEX1-218ENST00000557344 TRIM6Q9C030 488 aaPredicted RBP11.15□□□□□ -0.62
APEX1-218ENST00000557344 LMAN1LQ9HAT1 526 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 TUFT1Q9NNX1 390 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 AVENQ9NQS1 362 aaPredicted RBP11.15□□□□□ -0.62
APEX1-218ENST00000557344 KLK14Q9P0G3 267 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 PCDHB6Q9Y5E3 794 aa11.15□□□□□ -0.62
APEX1-218ENST00000557344 ZMYM2Q9UBW7 1377 aa11.15□□□□□ -0.63
APEX1-218ENST00000557344 INO80B-WBP1J3KQ70 363 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms