RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 MUTP22033 750 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 GPC5P78333 572 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 ORC2Q13416 577 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 UVSSAQ2YD98 709 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 XKR4Q5GH76 650 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 PPM1LQ5SGD2 360 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 PDXDC1Q6P996 788 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 RTL10Q7L3V2 364 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 ERMP1Q7Z2K6 904 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 C1orf210Q8IVY1 113 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 C4orf32Q8N8J7 132 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 ITFG1Q8TB96 612 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 KIFC3Q9BVG8 833 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 FOXQ1Q9C009 403 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 CIZ1Q9ULV3 898 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 R4GN57 208 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 COL4A3Q01955 1670 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 SPTBN4Q9H254 2564 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 CCL16O15467 120 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 LRRN2O75325 713 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 LMNAP02545 664 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 OR52Z1P0C646 297 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 SP9P0CG40 484 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 OR1D2P34982 312 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 TRAPPC10P48553 1259 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 GNL2Q13823 731 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 UPP1Q16831 310 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 DCAF4L1Q3SXM0 396 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 AXDND1Q5T1B0 1012 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 LIN9Q5TKA1 542 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 ALKAL1Q6UXT8 129 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 BRAPQ7Z569 592 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 C3orf58Q8NDZ4 430 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 DEPTORQ8TB45 409 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 SLC7A14Q8TBB6 771 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 ADPGKQ9BRR6 497 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 HCFC1R1Q9NWW0 138 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 DNMT3BQ9UBC3 853 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 MTMR6Q9Y217 621 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 GDAQ9Y2T3 454 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 BACE2Q9Y5Z0 518 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 MYH15Q9Y2K3 1946 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 VPS37CA5D8V6 355 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 ARHGEF35A5YM69 484 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 XYLBO75191 536 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 B3GAT3O94766 335 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 TKTP29401 623 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 ID4P47928 161 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 CLCNKBP51801 687 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 EFNA5P52803 228 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 SOX4Q06945 474 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 PPP2R5AQ15172 486 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 ZNF174Q15697 407 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 SPECC1Q5M775 1068 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 ATF7IP2Q5U623 682 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 MCTP1Q6DN14 999 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 MTSS1LQ765P7 747 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 NPAS3Q8IXF0 933 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 SPRYD3Q8NCJ5 442 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 ERMNQ8TAM6 284 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 POLD4Q9HCU8 107 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 PTPRHQ9HD43 1115 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 AVENQ9NQS1 362 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 KCNH3Q9ULD8 1083 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 TNFSF13BQ9Y275 285 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 MTF2Q9Y483 593 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 FANCMQ8IYD8 2048 aa11.78□□□□□ -0.52
HNRNPC-230ENST00000557201 DMXL1Q9Y485 3027 aa11.77□□□□□ -0.52
HNRNPC-230ENST00000557201 SMIM28A0A1B0GU29 152 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 KANSL1LA0AUZ9 987 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 ARHGEF37A1IGU5 675 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 SHISA7A6NL88 538 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 ABLIM1O14639 778 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 TBC1D4O60343 1298 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 RFX1P22670 979 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 DDIT3P35638 169 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 PRKCQQ04759 706 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 SNW1Q13573 536 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 GSE1Q14687 1217 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 MLF2Q15773 248 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 SLC44A4Q53GD3 710 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 RILPL1Q5EBL4 403 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 GLRA4Q5JXX5 417 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 SLC8B1Q6J4K2 584 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 TAS1R3Q7RTX0 852 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 DAW1Q8N136 415 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 CEP120Q8N960 986 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 SUMF1Q8NBK3 374 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 KIFAP3Q92845 792 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 SHDQ96IW2 340 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 UROC1Q96N76 676 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 OSBPL6Q9BZF3 934 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 BHMT2Q9H2M3 363 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 GOLGA2P5Q9HBQ8 144 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 CDY1Q9Y6F8 540 aa11.77□□□□□ -0.53
HNRNPC-230ENST00000557201 ZNF292O60281 2723 aa11.76□□□□□ -0.53
HNRNPC-230ENST00000557201 MEFVO15553 781 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms