RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 AFAP1L1Q8TED9 768 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 BSNDQ8WZ55 320 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 HERVK_113Q902F9 699 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 TTC9Q92623 222 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 ZNF668Q96K58 619 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 CEP170P1Q96L14 293 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 REEP2Q9BRK0 252 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 TRIM9Q9C026 710 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 NT5C3AQ9H0P0 336 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 IKZF4Q9H2S9 585 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 ZHX3Q9H4I2 956 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 EPHX3Q9H6B9 360 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 AZI2Q9H6S1 392 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 SLC28A3Q9HAS3 691 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 XPNPEP1Q9NQW7 623 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 STARD7Q9NQZ5 370 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 TBC1D7Q9P0N9 293 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 USP25Q9UHP3 1055 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 TUBE1Q9UJT0 475 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 GDAQ9Y2T3 454 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 EMSYQ7Z589 1322 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 MROH7Q68CQ1 1323 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 ARHGEF35A5YM69 484 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 SLC26A4O43511 780 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 FZD6O60353 706 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 HIP1RO75146 1068 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 FGBP02675 491 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 KRT18P05783 430 aaKnown RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 HOXD8P13378 290 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 INSRRP14616 1297 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 NMT1P30419 496 aaKnown RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 CDK7P50613 346 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 ACLYP53396 1101 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 NLRP12P59046 1061 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 PURAQ00577 322 aaKnown RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 STK4Q13043 487 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 COASYQ13057 564 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 MAPK7Q13164 816 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 MORC3Q14149 939 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 TARBP2Q15633 366 aaKnown RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 PCSK7Q16549 785 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 DGKDQ16760 1214 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 DPCR1Q3MIW9 517 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 XKR3Q5GH77 459 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 CCSAPQ6IQ19 270 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 PSRC1Q6PGN9 363 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 CXCL17Q6UXB2 119 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 ZNF365Q70YC5 407 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 PLPPR4Q7Z2D5 763 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 SFR1Q86XK3 245 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 WFDC8Q8IUA0 241 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 GLYCTKQ8IVS8 523 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 KSR1Q8IVT5 923 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 ELOA2Q8IYF1 753 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 LRRC71Q8N4P6 559 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 KLHDC9Q8NEP7 349 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 ASAP3Q8TDY4 903 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 ATP8B4Q8TF62 1192 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 ATP6V0A1Q93050 837 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 SMARCE1Q969G3 411 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 SYAP1Q96A49 352 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 TMEM143Q96AN5 459 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 NECAB3Q96P71 396 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 PPP1R16BQ96T49 567 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 PYM1Q9BRP8 204 aaKnown RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 KIFC3Q9BVG8 833 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 SMG9Q9H0W8 520 aaKnown RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 UPF3AQ9H1J1 476 aaKnown RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 DNAJC25Q9H1X3 360 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 MTIF3Q9H2K0 278 aaKnown RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 CUEDC2Q9H467 287 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 SMARCAD1Q9H4L7 1026 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 SLC39A2Q9NP94 309 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 CYP26B1Q9NR63 512 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 ANKEF1Q9NU02 776 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 SETD4Q9NVD3 440 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 PANK4Q9NVE7 773 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 DBR1Q9UK59 544 aaKnown RBP5.86□□□□□ -1.47
ATXN3-244ENST00000556898 TBX21Q9UL17 535 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 MAPK8IP1Q9UQF2 711 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 Q9Y3F1 56 aa5.86□□□□□ -1.47
ATXN3-244ENST00000556898 GRIN2DO15399 1336 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 J3QW42 95 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 ARVCFO00192 962 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 HAS3O00219 553 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 PPFIA4O75335 1185 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 SMC2O95347 1197 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 F2P00734 622 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 ASGR1P07306 291 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 SMIM10L2AP0DMW4 78 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 SMIM10L2BP0DMW5 78 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 MYBP10242 640 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 ACRP10323 421 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 XRCC6P12956 609 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATXN3-244ENST00000556898 CSF2RAP15509 400 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 POU3F3P20264 500 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-244ENST00000556898 MUTP22033 750 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 MZF1P28698 734 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-244ENST00000556898 CPT1AP50416 773 aa5.85□□□□□ -1.47
ATXN3-244ENST00000556898 CLCN3P51790 818 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms