RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 KIF12Q96FN5 646 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 TMEM169Q96HH4 297 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 IGSF21Q96ID5 467 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 RBAKQ9NYW8 714 aaPredicted RBP19.01■□□□□ 0.63
SHMT2-225ENST00000556798 REV3LO60673 3130 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 KIAA0391O15091 583 aaKnown RBP19■□□□□ 0.63
SHMT2-225ENST00000556798 LDHAP00338 332 aaKnown RBP19■□□□□ 0.63
SHMT2-225ENST00000556798 BMP6P22004 513 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 SNRPFP62306 86 aaKnown RBP19■□□□□ 0.63
SHMT2-225ENST00000556798 PLCB3Q01970 1234 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 CAMK1Q14012 370 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 MORC3Q14149 939 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 JADE1Q6IE81 842 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 C12orf56Q8IXR9 622 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 MICALL1Q8N3F8 863 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 GOLGA5Q8TBA6 731 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 HASPINQ8TF76 798 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 POF1BQ8WVV4 589 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 SLC38A7Q9NVC3 462 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 KIAA1468Q9P260 1216 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 CGNQ9P2M7 1197 aaKnown RBP19■□□□□ 0.63
SHMT2-225ENST00000556798 SCN1AP35498 2009 aa19■□□□□ 0.63
SHMT2-225ENST00000556798 PDXKO00764 312 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 CALUO43852 315 aaPredicted RBP18.99■□□□□ 0.63
SHMT2-225ENST00000556798 KIF4AO95239 1232 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 NR3C1P04150 777 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 ADRB2P07550 413 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 CD44P16070 742 aaKnown RBP18.99■□□□□ 0.63
SHMT2-225ENST00000556798 CLCNKBP51801 687 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 GUCY2FP51841 1108 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 HSP90AA2PQ14568 343 aaPredicted RBP18.99■□□□□ 0.63
SHMT2-225ENST00000556798 XXYLT1Q8NBI6 393 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 RDH13Q8NBN7 331 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 FAM84AQ96KN4 292 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 VN1R3Q9BXE9 311 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 PCDHGC5Q9Y5F6 944 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 MTCH2Q9Y6C9 303 aa18.99■□□□□ 0.63
SHMT2-225ENST00000556798 EXOC3O60645 756 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 IL18RAPO95256 599 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 IGFBP6P24592 240 aaPredicted RBP18.98■□□□□ 0.63
SHMT2-225ENST00000556798 IRS1P35568 1242 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 KRT17Q04695 432 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 TMEM132DQ14C87 1099 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 SNRNP35Q16560 246 aaKnown RBP18.98■□□□□ 0.63
SHMT2-225ENST00000556798 PTPROQ16827 1216 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 CD302Q8IX05 232 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 EFCAB13Q8IY85 973 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 ADSSL1Q8N142 457 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 MRPL38Q96DV4 380 aaKnown RBP18.98■□□□□ 0.63
SHMT2-225ENST00000556798 FBXL18Q96ME1 805 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 COLEC11Q9BWP8 271 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 LMAN2LQ9H0V9 348 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 ASB7Q9H672 318 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 TLR9Q9NR96 1032 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 UBQLN1Q9UMX0 589 aaKnown RBP18.98■□□□□ 0.63
SHMT2-225ENST00000556798 EYSQ5T1H1 3165 aa18.98■□□□□ 0.63
SHMT2-225ENST00000556798 CARNS1A5YM72 827 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 TRIM49BA6NDI0 452 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 ZNF233A6NK53 670 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 PODXLO00592 558 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 MBD3O95983 291 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 ERVFC1P60507 584 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 UBE3AQ05086 875 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 ZBTB6Q15916 424 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 UPP1Q16831 310 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 ZCWPW2Q504Y3 356 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 COBLL1Q53SF7 1204 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 KLHL10Q6JEL2 608 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 C3orf58Q8NDZ4 430 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 PDE11AQ9HCR9 933 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 DMAC2Q9NW81 257 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 ADAM28Q9UKQ2 775 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 TRAF3IP3Q9Y228 551 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 LZTS1Q9Y250 596 aa18.97■□□□□ 0.63
SHMT2-225ENST00000556798 NR2F2P24468 414 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 CASP4P49662 377 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 PMS1P54277 932 aaKnown RBP18.96■□□□□ 0.63
SHMT2-225ENST00000556798 POU5F1Q01860 360 aaKnown RBP18.96■□□□□ 0.63
SHMT2-225ENST00000556798 STIM1Q13586 685 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 PLPP4Q5VZY2 271 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 CEP135Q66GS9 1140 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 LMBRD2Q68DH5 695 aaPredicted RBP18.96■□□□□ 0.63
SHMT2-225ENST00000556798 DDX53Q86TM3 631 aaKnown RBP18.96■□□□□ 0.63
SHMT2-225ENST00000556798 SLC9A9Q8IVB4 645 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 VPS52Q8N1B4 723 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 UROC1Q96N76 676 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 TCF25Q9BQ70 676 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 GTPBP4Q9BZE4 634 aaKnown RBP18.96■□□□□ 0.63
SHMT2-225ENST00000556798 KIAA1586Q9HCI6 787 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 ENTPD7Q9NQZ7 604 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 PUF60Q9UHX1 559 aaKnown RBP18.96■□□□□ 0.63
SHMT2-225ENST00000556798 C2CD2Q9Y426 696 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 PTPRJQ12913 1337 aa18.96■□□□□ 0.63
SHMT2-225ENST00000556798 TSC2P49815 1807 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 PPP1R3GB7ZBB8 358 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 PSMA7O14818 248 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 XPOTO43592 962 aaKnown RBP18.95■□□□□ 0.62
SHMT2-225ENST00000556798 TADA2AO75478 443 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 B3GAT3O94766 335 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 POU3F3P20264 500 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms