RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 FSD2A1L4K1 749 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 I3L4J1 428 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 TNFRSF10AO00220 468 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 SRGAP2BP0DMP2 458 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 GAP43P17677 238 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 KLRC2P26717 231 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 BRCC3P46736 316 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 ASIC1P78348 528 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 DSG1Q02413 1049 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 SMAD2Q15796 467 aaKnown RBP11.32□□□□□ -0.6
SNX6-208ENST00000556712 PUS10Q3MIT2 529 aaKnown RBP11.32□□□□□ -0.6
SNX6-208ENST00000556712 HERC4Q5GLZ8 1057 aaPredicted RBP11.32□□□□□ -0.6
SNX6-208ENST00000556712 RTP2Q5QGT7 225 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 KIAA0319Q5VV43 1072 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 SYCE2Q6PIF2 218 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 PRSS55Q6UWB4 352 aaPredicted RBP11.32□□□□□ -0.6
SNX6-208ENST00000556712 TMEM184AQ6ZMB5 413 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 ZNF720Q7Z2F6 126 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 CEP57Q86XR8 500 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 C12orf76Q8N812 135 aaPredicted RBP11.32□□□□□ -0.6
SNX6-208ENST00000556712 SLC22A17Q8WUG5 538 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 CASP10Q92851 521 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNX6-208ENST00000556712 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 TRIM9Q9C026 710 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 BLZF1Q9H2G9 400 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 ST6GALNAC4Q9H4F1 302 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 CHST7Q9NS84 486 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 KBTBD4Q9NVX7 518 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 FAM13BQ9NYF5 915 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 SEL1LQ9UBV2 794 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 TTC28Q96AY4 2481 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 TSC2P49815 1807 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 A0A1B0GVL5 298 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 PODXLO00592 558 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 OGTO15294 1046 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 TEX28O15482 410 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 B3GAT3O94766 335 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 CLTAP09496 248 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 WEE2P0C1S8 567 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 KCNE1P15382 129 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 PFKFB1P16118 471 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 SP100P23497 879 aaPredicted RBP11.31□□□□□ -0.6
SNX6-208ENST00000556712 SSTR3P32745 418 aaPredicted RBP11.31□□□□□ -0.6
SNX6-208ENST00000556712 AFMP43652 599 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 ACOT2P49753 483 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 CLCN4P51793 760 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 GUCY2FP51841 1108 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 ZP2Q05996 745 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 PPP2R3AQ06190 1150 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 ENOX2Q16206 610 aaKnown RBP11.31□□□□□ -0.6
SNX6-208ENST00000556712 UPP1Q16831 310 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 USP41Q3LFD5 358 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 RARS2Q5T160 578 aaKnown RBP11.31□□□□□ -0.6
SNX6-208ENST00000556712 L1TD1Q5T7N2 865 aaKnown RBP11.31□□□□□ -0.6
SNX6-208ENST00000556712 FAM171A1Q5VUB5 890 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 CD300LGQ6UXG3 332 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 CCDC65Q8IXS2 484 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 IQUBQ8NA54 791 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 ZSWIM2Q8NEG5 633 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 RIN2Q8WYP3 895 aaPredicted RBP11.31□□□□□ -0.6
SNX6-208ENST00000556712 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 FAM212AQ96EL1 285 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 STRA6Q9BX79 667 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 S1PR5Q9H228 398 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 CUEDC2Q9H467 287 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 OLFML3Q9NRN5 406 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 SLC38A7Q9NVC3 462 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 STK39Q9UEW8 545 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 SERTAD1Q9UHV2 236 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 KCNH3Q9ULD8 1083 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 MUC3AQ02505 3323 aa11.31□□□□□ -0.6
SNX6-208ENST00000556712 TTC26A0AVF1 554 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 LACTBL1A8MY62 500 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 TMEM189-UBE2V1I3L0A0 370 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 PRPF6O94906 941 aaKnown RBP11.3□□□□□ -0.6
SNX6-208ENST00000556712 ADH1AP07327 375 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 SPATA31D3P0C874 917 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 SCP2P22307 547 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 TKTP29401 623 aaKnown RBP11.3□□□□□ -0.6
SNX6-208ENST00000556712 ADSSP30520 456 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 CUL4BQ13620 913 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 ADALQ6DHV7 355 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 SPATA31D4Q6ZUB0 917 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 GJD3Q8N144 294 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 POMGNT1Q8WZA1 660 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 SUSD6Q92537 303 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 SAAL1Q96ER3 474 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 FBXL18Q96ME1 805 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 UROC1Q96N76 676 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 ACCSQ96QU6 501 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 TTPALQ9BTX7 342 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 RPF1Q9H9Y2 349 aaKnown RBP11.3□□□□□ -0.6
SNX6-208ENST00000556712 MAN1C1Q9NR34 630 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 CPSF3Q9UKF6 684 aaKnown RBP11.3□□□□□ -0.6
SNX6-208ENST00000556712 FAM50BQ9Y247 325 aa11.3□□□□□ -0.6
SNX6-208ENST00000556712 MTCL1Q9Y4B5 1905 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms