RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ZNF771Q7L3S4 317 aaPredicted RBP19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 TMEM192Q8IY95 271 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 CPB2Q96IY4 423 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 TSKSQ9UJT2 592 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 DNAH12Q6ZR08 3092 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 A0A0A6YYK5 440 aaPredicted RBP19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 ANKRD62A6NC57 917 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 VGLL3A8MV65 326 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 KCNK3O14649 394 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 ZMYND10O75800 440 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 VSNL1P62760 191 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 MAP2K5Q13163 448 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 GRM1Q13255 1194 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 MORN1Q5T089 497 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 IQSEC1Q6DN90 963 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 RGMBQ6NW40 437 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 MSANTD4Q8NCY6 345 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 RFFLQ8WZ73 363 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 SLC5A4Q9NY91 659 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 COG5Q9UP83 839 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 MANSC4A6NHS7 340 aaPredicted RBP19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 ASAP2O43150 1006 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 BUB1BO60566 1050 aaPredicted RBP19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 ZC3H11AO75152 810 aaKnown RBP eCLIP19.68■□□□□ 0.749e-8■■□□□ 13.7
SDR39U1-220ENST00000556548 SSTR3P32745 418 aaPredicted RBP19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 PAFAH1B1P43034 410 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 NCOA4Q13772 614 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 GRIK4Q16099 956 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 DGKDQ16760 1214 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 PEX26Q7Z412 305 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 TMEM130Q8N3G9 435 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 SPATA4Q8NEY3 305 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 NLRP7Q8WX94 980 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 SCLT1Q96NL6 688 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 PTPRHQ9HD43 1115 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 SETD4Q9NVD3 440 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 CPSF3Q9UKF6 684 aaKnown RBP19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 NUB1Q9Y5A7 615 aa19.68■□□□□ 0.74
SDR39U1-220ENST00000556548 PHKA2P46019 1235 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 TFAMQ00059 246 aaKnown RBP19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 MARCH8Q5T0T0 291 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 CC2D1AQ6P1N0 951 aaPredicted RBP19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 TAF4BQ92750 862 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 DOCK3Q8IZD9 2030 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 NCANO14594 1321 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 MAGEB2O15479 319 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 KIF4AO95239 1232 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 PROZP22891 400 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 TMOD1P28289 359 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 CDR2Q01850 454 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 TMEM62Q0P6H9 643 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 DDX1Q92499 740 aaKnown RBP19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 RPGRIP1Q96KN7 1286 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 ISCUQ9H1K1 167 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 CDT1Q9H211 546 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 GINS2Q9Y248 185 aa19.67■□□□□ 0.74
SDR39U1-220ENST00000556548 RTN2O75298 545 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 TUBB4BP68371 445 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 NOP14P78316 857 aaKnown RBP19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 CUL2Q13617 745 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 OLFML2BQ68BL8 750 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 ENOSF1Q7L5Y1 443 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 IFNL1Q8IU54 200 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 LINC01465Q8N7H1 131 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 LMBR1Q8WVP7 490 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 ZBTB9Q96C00 473 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 CTTNBP2NLQ9P2B4 639 aa19.66■□□□□ 0.74
SDR39U1-220ENST00000556548 GPR25O00155 361 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 CXCL8P10145 99 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 FGFR4P22455 802 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 CFAP221Q4G0U5 840 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 RBM12Q9NTZ6 932 aaKnown RBP19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 PCDHB4Q9Y5E5 795 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 ATP8B3O60423 1300 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 MYL6P60660 151 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 TMEM270Q6UE05 265 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 NT5DC3Q86UY8 548 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 WDR49Q8IV35 697 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 FAM49AQ9H0Q0 323 aaPredicted RBP19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 ARFGAP3Q9NP61 516 aa19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 PRMT7Q9NVM4 692 aaPredicted RBP19.65■□□□□ 0.74
SDR39U1-220ENST00000556548 TMEM110-MUSTN1A8MSY1 372 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 GPC5P78333 572 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 C17orf99Q6UX52 265 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 SLFN11Q7Z7L1 901 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 EFCAB13Q8IY85 973 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 ZIC5Q96T25 663 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 LRRC1Q9BTT6 524 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 PLEKHA4Q9H4M7 779 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 OGFRQ9NZT2 677 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 RAB21Q9UL25 225 aa19.64■□□□□ 0.74
SDR39U1-220ENST00000556548 ZRANB2O95218 330 aaKnown RBP eCLIP19.64■□□□□ 0.73
SDR39U1-220ENST00000556548 CLTAP09496 248 aa19.64■□□□□ 0.73
SDR39U1-220ENST00000556548 HOXC6P09630 235 aa19.64■□□□□ 0.73
SDR39U1-220ENST00000556548 ACO1P21399 889 aaKnown RBP19.64■□□□□ 0.73
SDR39U1-220ENST00000556548 GABPB1Q06547 395 aaPredicted RBP19.64■□□□□ 0.73
SDR39U1-220ENST00000556548 AMHR2Q16671 573 aa19.64■□□□□ 0.73
SDR39U1-220ENST00000556548 DUOXA2Q1HG44 320 aa19.64■□□□□ 0.73
SDR39U1-220ENST00000556548 PHLDB2Q86SQ0 1253 aa19.64■□□□□ 0.73
SDR39U1-220ENST00000556548 HDAC7Q8WUI4 952 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms