RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CHURC1-FNTBB4DL54 471 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 M0R2N6 131 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 PTGESO14684 152 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 DGAT1O75907 488 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 RECQL4O94761 1208 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 DEXIO95424 95 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 PTPN2P17706 415 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 RPS6KB1P23443 525 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 PDIA3P30101 505 aaKnown RBP15.4■□□□□ 0.06
ACTN1-219ENST00000556432 GDI1P31150 447 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 ARL2P36404 184 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 FNTBP49356 437 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-219ENST00000556432 SRSF5Q13243 272 aaKnown RBP15.4■□□□□ 0.06
ACTN1-219ENST00000556432 FAM78AQ5JUQ0 283 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 CEP68Q76N32 757 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 RTL10Q7L3V2 364 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 NFKBIZQ9BYH8 718 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 KCNJ14Q9UNX9 436 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 FAM208BQ5VWN6 2430 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 NOTCH4Q99466 2003 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 N4BP3O15049 544 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 FOXD2O60548 495 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-219ENST00000556432 USO1O60763 962 aaKnown RBP15.39■□□□□ 0.05
ACTN1-219ENST00000556432 B3GAT3O94766 335 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 BAG4O95429 457 aaKnown RBP15.39■□□□□ 0.05
ACTN1-219ENST00000556432 LIG1P18858 919 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 FGFR3P22607 806 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 FCARP24071 287 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 TKTP29401 623 aaKnown RBP15.39■□□□□ 0.05
ACTN1-219ENST00000556432 ARPP19P56211 112 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 ANKS3Q6ZW76 656 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 MAEAQ7L5Y9 396 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 ZBTB8OSQ8IWT0 167 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 HAS1Q92839 578 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 TCEAL4Q96EI5 215 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 AIFM3Q96NN9 605 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 ADPGKQ9BRR6 497 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 GDAQ9Y2T3 454 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 SNX14Q9Y5W7 946 aa15.39■□□□□ 0.05
ACTN1-219ENST00000556432 RALGAPA1Q6GYQ0 2036 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 I3L4J1 428 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 ZNF197O14709 1029 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 TBX3O15119 743 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 HRO43593 1189 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 PSMC3P17980 439 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 NPY5RQ15761 445 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 BMP2KLQ5H9B9 411 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 CPLX2Q6PUV4 134 aaKnown RBP15.38■□□□□ 0.05
ACTN1-219ENST00000556432 MAMSTRQ6ZN01 415 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 PIK3AP1Q6ZUJ8 805 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 PDZD4Q76G19 769 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-219ENST00000556432 NOSTRINQ8IVI9 506 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 SLFN12Q8IYM2 578 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 ZNF687Q8N1G0 1237 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 ELMOD1Q8N336 334 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 C12orf50Q8NA57 414 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-219ENST00000556432 NAP1L4Q99733 375 aaKnown RBP15.38■□□□□ 0.05
ACTN1-219ENST00000556432 EIF2AK1Q9BQI3 630 aaKnown RBP15.38■□□□□ 0.05
ACTN1-219ENST00000556432 PDZD7Q9H5P4 517 aa15.38■□□□□ 0.05
ACTN1-219ENST00000556432 ZNF334Q9HCZ1 680 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-219ENST00000556432 AVENQ9NQS1 362 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-219ENST00000556432 PRMT7Q9NVM4 692 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-219ENST00000556432 VWA8A3KMH1 1905 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 ZNF263O14978 683 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 TRAPPC3O43617 180 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 CDC45O75419 566 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 SLITRK3O94933 977 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 CCNE1P24864 410 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 PSMA5P28066 241 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 SPIRE1Q08AE8 756 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 PRPF4BQ13523 1007 aaKnown RBP15.37■□□□□ 0.05
ACTN1-219ENST00000556432 GLRA4Q5JXX5 417 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 N4BP2L1Q5TBK1 243 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-219ENST00000556432 CYP4A22Q5TCH4 519 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 POTEHQ6S545 545 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 LONP2Q86WA8 852 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 FBXL16Q8N461 479 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 CSGALNACT1Q8TDX6 532 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 PIGOQ8TEQ8 1089 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 SMARCD2Q92925 531 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 DDX27Q96GQ7 796 aaKnown RBP15.37■□□□□ 0.05
ACTN1-219ENST00000556432 PRIMPOLQ96LW4 560 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 ASB16Q96NS5 453 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 AGXT2Q9BYV1 514 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 CXCL16Q9H2A7 254 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 SLITRK6Q9H5Y7 841 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 CYP4F11Q9HBI6 524 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 GPRC5CQ9NQ84 441 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 ANKEF1Q9NU02 776 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 BACE2Q9Y5Z0 518 aa15.37■□□□□ 0.05
ACTN1-219ENST00000556432 WDR27A2RRH5 827 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 IGFBP6P24592 240 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-219ENST00000556432 PMLP29590 882 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 CNR2P34972 360 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 VIPR2P41587 438 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 CLCNKBP51801 687 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 KPNA1P52294 538 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-219ENST00000556432 ROR1Q01973 937 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms