RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 FAM135BQ49AJ0 1406 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 ZMYM3Q14202 1370 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 RICTORQ6R327 1708 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 SUPT6HQ7KZ85 1726 aaKnown RBP4.3□□□□□ -1.72
SRP54-209ENST00000555746 NPEPPSL1A6NEC2 478 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 WNT10BO00744 389 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 PJA2O43164 708 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 TEX33O43247 280 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 PRICKLE3O43900 615 aaPredicted RBP4.3□□□□□ -1.72
SRP54-209ENST00000555746 CTNND1O60716 968 aaKnown RBP4.3□□□□□ -1.72
SRP54-209ENST00000555746 RAD17O75943 681 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 ARIH2O95376 493 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 ALDH2P05091 517 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 INHBBP09529 407 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 DDCP20711 480 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 PCSK1P29120 753 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 PTPN7P35236 360 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 GNALP38405 381 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 MAP2K6P52564 334 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 HK3P52790 923 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 CTXN1P60606 82 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 TLE1Q04724 770 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 GRM7Q14831 915 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 METTL24Q5JXM2 366 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 MFSD14BQ5SR56 506 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 UBXN11Q5T124 520 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 OTUD7BQ6GQQ9 843 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 CCSAPQ6IQ19 270 aaPredicted RBP4.3□□□□□ -1.72
SRP54-209ENST00000555746 MFSD5Q6N075 450 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 TCTN3Q6NUS6 607 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 SPOCD1Q6ZMY3 1216 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 NOL8Q76FK4 1167 aaKnown RBP4.3□□□□□ -1.72
SRP54-209ENST00000555746 CHST15Q7LFX5 561 aaPredicted RBP4.3□□□□□ -1.72
SRP54-209ENST00000555746 MDM1Q8TC05 714 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 CCHCR1Q8TD31 782 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 RGMAQ96B86 450 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 CEP95Q96GE4 821 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 ZNF512Q96ME7 567 aaPredicted RBP4.3□□□□□ -1.72
SRP54-209ENST00000555746 GNRHR2Q96P88 292 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 RBM15Q96T37 977 aaKnown RBP eCLIP4.3□□□□□ -1.72
SRP54-209ENST00000555746 MPHOSPH9Q99550 1183 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 ADAM7Q9H2U9 754 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 KMT5AQ9NQR1 393 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 PLA2G3Q9NZ20 509 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 RTEL1Q9NZ71 1219 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 MOCS1Q9NZB8 636 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 FAM30AQ9NZY2 134 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 NCDNQ9UBB6 729 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 GABBR1Q9UBS5 961 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 RAPGEFL1Q9UHV5 662 aa4.3□□□□□ -1.72
SRP54-209ENST00000555746 AJAP1Q9UKB5 411 aaPredicted RBP4.3□□□□□ -1.72
SRP54-209ENST00000555746 RNF17Q9BXT8 1623 aaKnown RBP4.29□□□□□ -1.72
SRP54-209ENST00000555746 ZNF536O15090 1300 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 B5MCH6 92 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 GPR42O15529 346 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 PRC1O43663 620 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 B3GALT2O43825 422 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 TUSC2O75896 110 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 STC2O76061 302 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 UBXN7O94888 489 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 FTLP02792 175 aaPredicted RBP4.29□□□□□ -1.72
SRP54-209ENST00000555746 HRGP04196 525 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 FPR1P21462 350 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 AGFG1P52594 562 aaKnown RBP4.29□□□□□ -1.72
SRP54-209ENST00000555746 PTH1RQ03431 593 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 NOGQ13253 232 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 GRM3Q14832 879 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 ARHGAP29Q52LW3 1261 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 DACT2Q5SW24 774 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 FKBP15Q5T1M5 1219 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 SEM1Q6ZVN7 128 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 OVCH2Q7RTZ1 564 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 GPRIN1Q7Z2K8 1008 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 APBB1IPQ7Z5R6 666 aaPredicted RBP4.29□□□□□ -1.72
SRP54-209ENST00000555746 SRGAP1Q7Z6B7 1085 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 CIR1Q86X95 450 aaPredicted RBP4.29□□□□□ -1.72
SRP54-209ENST00000555746 PLXDC1Q8IUK5 500 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 FUKQ8N0W3 1084 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 FAM43AQ8N2R8 423 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 ZBTB34Q8NCN2 500 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 C3orf20Q8ND61 904 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 GIMAP8Q8ND71 665 aaPredicted RBP4.29□□□□□ -1.72
SRP54-209ENST00000555746 DNERQ8NFT8 737 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 ARL8AQ96BM9 186 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 TMX3Q96JJ7 454 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 CLPTM1LQ96KA5 538 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 FAM167AQ96KS9 214 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 CGRRF1Q99675 332 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 LRFN3Q9BTN0 628 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 TMEM60Q9H2L4 133 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 LDAHQ9H6V9 325 aa4.29□□□□□ -1.72
SRP54-209ENST00000555746 HECAQ9UBI9 543 aaPredicted RBP4.29□□□□□ -1.72
SRP54-209ENST00000555746 DDX20Q9UHI6 824 aaKnown RBP4.29□□□□□ -1.72
SRP54-209ENST00000555746 ZFR2Q9UPR6 939 aaKnown RBP4.29□□□□□ -1.72
SRP54-209ENST00000555746 EFCAB5A4FU69 1503 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 A0A088AWK7 358 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 A0A0G2JLL6 359 aaPredicted RBP4.28□□□□□ -1.72
SRP54-209ENST00000555746 TBKBP1A7MCY6 615 aa4.28□□□□□ -1.72
SRP54-209ENST00000555746 CXorf49A8MYA2 514 aaPredicted RBP4.28□□□□□ -1.72
SRP54-209ENST00000555746 PATE3B3GLJ2 98 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms