RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 MYOGP15173 224 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 LAG3P18627 525 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 CYP3A5P20815 502 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 PBX2P40425 430 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 DSC1Q08554 894 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 ZBTB6Q15916 424 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 JADE1Q6IE81 842 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 FRMD5Q7Z6J6 570 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 ZNF280BQ86YH2 543 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 WDR49Q8IV35 697 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 BEST2Q8NFU1 509 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 TMC2Q8TDI7 906 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 PARD3BQ8TEW8 1205 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 CLP1Q92989 425 aaKnown RBP15.48■□□□□ 0.07
CHD8-208ENST00000555301 CCDC127Q96BQ5 260 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 UROC1Q96N76 676 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 TMEM175Q9BSA9 504 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 GZF1Q9H116 711 aaPredicted RBP15.48■□□□□ 0.07
CHD8-208ENST00000555301 CXCL16Q9H2A7 254 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 THAP9Q9H5L6 903 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 CWH43Q9H720 699 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 NRDE2Q9H7Z3 1164 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 PLAGL2Q9UPG8 496 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 YBX2Q9Y2T7 364 aaKnown RBP15.48■□□□□ 0.07
CHD8-208ENST00000555301 CEP290O15078 2479 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 LINC01553A4QN01 128 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 ZC3H11AO75152 810 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHD8-208ENST00000555301 DDHD2O94830 711 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 ALDH2P05091 517 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 NFICP08651 508 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 DLATP10515 647 aaKnown RBP15.47■□□□□ 0.07
CHD8-208ENST00000555301 TNNI1P19237 187 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 DNAJB2P25686 324 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 ALDH7A1P49419 539 aaKnown RBP15.47■□□□□ 0.07
CHD8-208ENST00000555301 VAMP7P51809 220 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 AP3M2P53677 418 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 MYL5Q02045 173 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 SPAG1Q07617 926 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 BFSP1Q12934 665 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 NAB2Q15742 525 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 DUOXA2Q1HG44 320 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 CCDC40Q4G0X9 1142 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 FAM114A1Q8IWE2 563 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 COLGALT2Q8IYK4 626 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 TIFAQ96CG3 184 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 DDX27Q96GQ7 796 aaKnown RBP15.47■□□□□ 0.07
CHD8-208ENST00000555301 ANKRD36BP1Q96IX9 119 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 SAMD11Q96NU1 681 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 CGRRF1Q99675 332 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 ANP32EQ9BTT0 268 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 SLC28A3Q9HAS3 691 aa15.47■□□□□ 0.07
CHD8-208ENST00000555301 ARMCX3Q9UH62 379 aaPredicted RBP15.47■□□□□ 0.07
CHD8-208ENST00000555301 SMTNL1A8MU46 457 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 IKBKBO14920 756 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 TNNC2P02585 160 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 TMEM191BP0C7N4 346 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 RPL9P32969 192 aaKnown RBP15.46■□□□□ 0.07
CHD8-208ENST00000555301 ZNF165P49910 485 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 MARSP56192 900 aaKnown RBP15.46■□□□□ 0.07
CHD8-208ENST00000555301 WNT7BP56706 349 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 MCCD1P59942 119 aaPredicted RBP15.46■□□□□ 0.07
CHD8-208ENST00000555301 CLDN10P78369 228 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 TFAMQ00059 246 aaKnown RBP15.46■□□□□ 0.07
CHD8-208ENST00000555301 PPP2R2DQ66LE6 453 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 LRSAM1Q6UWE0 723 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 EFCAB13Q8IY85 973 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 BORCS6Q96GS4 357 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 ZNF558Q96NG5 402 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 TGS1Q96RS0 853 aaKnown RBP15.46■□□□□ 0.07
CHD8-208ENST00000555301 NKX2-4Q9H2Z4 354 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 INTS13Q9NVM9 706 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 MAGEC2Q9UBF1 373 aaPredicted RBP15.46■□□□□ 0.07
CHD8-208ENST00000555301 NFE2L3Q9Y4A8 694 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 PCDHB12Q9Y5F1 795 aa15.46■□□□□ 0.07
CHD8-208ENST00000555301 RANBP2P49792 3224 aaKnown RBP15.45■□□□□ 0.06
CHD8-208ENST00000555301 CASTOR2A6NHX0 329 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 LRRIQ3A6PVS8 624 aaPredicted RBP15.45■□□□□ 0.06
CHD8-208ENST00000555301 STX10O60499 249 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 GALTP07902 379 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 LRPAP1P30533 357 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 PPM1AP35813 382 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 OR1G1P47890 313 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 BCAR1P56945 870 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 ZNF445P59923 1031 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 TAP1Q03518 808 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 KCNT2Q6UVM3 1135 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 COLGALT1Q8NBJ5 622 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 PLEKHO2Q8TD55 490 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 C18orf25Q96B23 403 aaPredicted RBP15.45■□□□□ 0.06
CHD8-208ENST00000555301 CNOT6LQ96LI5 555 aaKnown RBP15.45■□□□□ 0.06
CHD8-208ENST00000555301 COLEC11Q9BWP8 271 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 PLVAPQ9BX97 442 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 HCSTQ9UBK5 93 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 DNAJB4Q9UDY4 337 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 TUBGCP4Q9UGJ1 667 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 ITGA11Q9UKX5 1188 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 FAN1Q9Y2M0 1017 aa15.45■□□□□ 0.06
CHD8-208ENST00000555301 R3HCC1Q9Y3T6 440 aaKnown RBP15.45■□□□□ 0.06
CHD8-208ENST00000555301 TMEM265A0A087WTH1 108 aa15.44■□□□□ 0.06
CHD8-208ENST00000555301 BECN2A8MW95 431 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms